Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01769 ATGACGGAAATCGTTACAGCCTCCGTCATAACGTCGTCTCTGATTCCTCCGTCACAAACCCTAACCCTAACCCTATCTAACCCTAAGTCCCTAATCCCTCTTTCTCTTGGTGGTCACCGAAGCTACCCTCTCCTCGACTATCCCTCCCACGCGCAGCCTCACCTCCACGCTCCCACGCGCCACCACTTCCTTTCCTCCTCCTCCTCCAGTCCCACCACTCTCCCCGCCGCCGACATCGCCACCGCCGACTACTACCCACACGCCTCCTCCTTCTCCGACGACTCCGCCAAATCCAACTCCAAACGCGCCTCCGCCGCCGGCAGCCCCTACTACAACAAGAAGCTCAAATCCACCACCGATTCGGTTCCAGCGACCGATTACTCGAAGGACCGCGAAGAATGGAGCGACACGGCGATCGCGTGTCTGTTGGAGGCGTACACGGAGAAGTTCAACTTGCTGTACCGCGGCAACCTCCGCAGCCGCGACTGGGAGGAGGTGGCGGAGGCGGTGGGGGGACGGTGCGGCGGAGAGGGGAAGCATCAGAAGAGCGTGGAGCAGTGTAAGAATAAGATTGATAATTTGAAGAAGAGTAGTGGTGCTGCTGCTGCTAATTCTCCTTCTATGGCTAGACAAACCAAGAACAGATATGCACCTAGCAACGCTACTGTGGCAATCAACCTCAAATTGAAGCCGGCATCAAATCTGAAATGGCATAGAGTTTTGTTTAAAATTAGTGGCTCTGCATTGGCTGGAAACTGCCAGAACATTGACCCCAAGGTGGCAATGCAGATTGCTAGGGAAGTGGCAACAACTTGCCGCCTTGGGGTGGAGGTGGCCATTGTTGTTGGTGGTCGTAACTTCTTTTGTGGAGATGCATGGGTGTCTGCTACCGGGTTGGATAGACCTATGGCTTACCAAATAGGTATGATGGGAACAGTTATGAATTCTATTTTGCTTCAATCTGCTTTGGAAAAGCTGGGTGTTCAGACACGTGTTCAGAATACATTCTTGATGCCAGAGGTTGCTGAACCATATAGCAGGCAACGAGCTATTAGACATCTTGAGAAAGGAAGGGTCATATTTGGTGGTGTTGGTGCTGGCACTGGAAATCCACATTTTACCACTGATACAGCTGCAGCTCTCAGAGCTTCTGAGCGGAAATTGTTTCTAGGAACGTCACCTCCATGGACATGA 1194 0.5251 MTEIVTASVITSSLIPPSQTLTLTLSNPKSLIPLSLGGHRSYPLLDYPSHAQPHLHAPTRHHFLSSSSSSPTTLPAADIATADYYPHASSFSDDSAKSNSKRASAAGSPYYNKKLKSTTDSVPATDYSKDREEWSDTAIACLLEAYTEKFNLLYRGNLRSRDWEEVAEAVGGRCGGEGKHQKSVEQCKNKIDNLKKSSGAAAANSPSMARQTKNRYAPSNATVAINLKLKPASNLKWHRVLFKISGSALAGNCQNIDPKVAMQIAREVATTCRLGVEVAIVVGGRNFFCGDAWVSATGLDRPMAYQIGMMGTVMNSILLQSALEKLGVQTRVQNTFLMPEVAEPYSRQRAIRHLEKGRVIFGGVGAGTGNPHFTTDTAAALRASERKLFLGTSPPWT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01769 397 PANTHER URIDYLATE KINASE 74 196 - -
Gma20g01769 397 PANTHER KINASE, PUTATIVE-RELATED 74 196 - -
Gma20g01769 397 Gene3D - 134 197 - -
Gma20g01769 397 SUPERFAMILY Carbamate kinase-like 236 385 IPR036393 -
Gma20g01769 397 Pfam Myb/SANT-like DNA-binding domain 131 197 IPR044822 -
Gma20g01769 397 Pfam Amino acid kinase family 239 384 IPR001048 -
Gma20g01769 397 Gene3D - 229 388 IPR036393 -
Gma20g01769 397 PANTHER URIDYLATE KINASE 201 386 - -
Gma20g01769 397 PANTHER KINASE, PUTATIVE-RELATED 201 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01769 Gma-Chr20 45022885 45025579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01769 131 196 Trihelix Transcription Factor Family AT3G14180 47.761 3.65e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma20g01769 AA_kinase 7.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01769 - - gmx:100791426 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01769 20 45022885 45025579 Gma20g01769 20 45022885 45025579 ECH
Gma10g01942 10 46657971 46661144 Gma20g01769 20 45022885 45025579 GST