Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01761 ATGGGTGATCCTTATGGGCTACCGGAGGATCTCCGGCGGCTTATACCAGCCAGAAGTACCCATTTGAACCCTTCAGACACACACCTAATTGAACCACTTTGTGTTCACCATGGTCTCAGTAGTGCTGTTGCTGCTGCTACTGCTAGTGCTACTCCACCCATCACCTATGACGCCAACATGGTTGGGGACGTTTTCTTCCCTCGTGGTTTCACTCATCACTTTGCTCATCACCATGACTATTCTTCTTCCTCTGGCGTAAACCccgttgctactactgctcctgctactgctactactactgtctcggatcatgcattctgcagcaTGGAAAGTGCAGAGAAAGGGTGGTTTGGGTTTGATTCCGGGAACAACAGGTGGCCTAGACAGGAGACCCTTTCTCTTCTAGAGATCAGATCTCGTCTTGATTCCAAGTTCAGAGAGAACAATCAGAAAGCACCCTTGTGgaatgagatttctagGATAATGGCTGAGGAATTTGGGTACCAAAGAAGTGGAAAGAAATGCAAAGAGAAATTTGAGAATTTGTACAAGTATTACAAGAAGACAAAAGAAGGTAAAGCTAGTAGACAAGATGGGAAGCACTACAGGTTCTTCAGGCAGCTAGAAGCAATATGTGGAGATCAAGCAAATAACACTCATGCTCATGCCTCAACTTCAGATAAAACCCATCGTGCTGGTGGAAACACTGCTGCTACTATTCAAAAACAAACCTTCACAACCAACCAAGACCACAATAATGGTGATTCTAACAATAACCCCAAATGCTCAGAGAGCCTCAGCATCTCAAATTCATCTCAATTCGAGACATCCTCATCAGAGAACAACGATGAGGATCTTTCAGCTATTGCATTCATGATGAAGCAGTCAAGGGATGAGAAGCAGAAAGGGTTGGATCATACTCATAGGCCAAGTGATCATAGGAGGGTGAGAAAAAGCTGGAGAACAAAAGTGGAGGAGATAGTGGATTCCCACATGAGGAAGATCATACAGACTCAAGATGCTTGGATGGAGAGAATGTTGAGTGTTGTTGAGCAAAGAGAGCAAGAGATGGCATCTAGGGAGGAAGAAAGGAAGAGAAAAGAGTCAATGTGGTTTGACCAACAGGTGCATGAACTGTGGGCCAAAGAGAAAGCATGGGTTGAGGCAAGAGATGCTGCATTGATAGAGGTTGTGAGGAAACACATTGGGATAGGGATAGGACTTGAAGCATTGCCATTGGTCGAAGAAGAATCACCGAATAAGAATAAGAGCCAGGGAAGTATTGATGCCAATGAGTTTCCCTCTGAGGGTGTTGATCCTGGTAGAAGTAGTAGTAGTAGGTGGACAGAAATGGAGATTTCAAATTTGATGCAGCTAAGGACTAGTTTTGAGCAAAGATTCAGAGAAAATAATAATGGGTACATGGAGAATGGGGTTTGGGATGAAATAGCAGCAAAAATGGCTTGTTTGGGGTTTGATAGGAGTGCAAGTGAGTGCAAGCAAATATGGGAAGAGATCAGCATCTCTCTCAGAAGGACAGTGGATGAGTGTGATGATGGTGCAAAAAGAAGGCCTTGGTATTTGGGACTTAAGCTGACGGATGATGATCTTTGA 1614 0.4207 MGDPYGLPEDLRRLIPARSTHLNPSDTHLIEPLCVHHGLSSAVAAATASATPPITYDANMVGDVFFPRGFTHHFAHHHDYSSSSGVNPVATTAPATATTTVSDHAFCSMESAEKGWFGFDSGNNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGDQANNTHAHASTSDKTHRAGGNTAATIQKQTFTTNQDHNNGDSNNNPKCSESLSISNSSQFETSSSENNDEDLSAIAFMMKQSRDEKQKGLDHTHRPSDHRRVRKSWRTKVEEIVDSHMRKIIQTQDAWMERMLSVVEQREQEMASREEERKRKESMWFDQQVHELWAKEKAWVEARDAALIEVVRKHIGIGIGLEALPLVEEESPNKNKSQGSIDANEFPSEGVDPGRSSSSRWTEMEISNLMQLRTSFEQRFRENNNGYMENGVWDEIAAKMACLGFDRSASECKQIWEEISISLRRTVDECDDGAKRRPWYLGLKLTDDDL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01761 537 SMART sant 444 509 IPR001005 -
Gma20g01761 537 SMART sant 122 185 IPR001005 -
Gma20g01761 537 MobiDBLite consensus disorder prediction 297 318 - -
Gma20g01761 537 CDD GT1 446 513 - -
Gma20g01761 537 Coils Coil 350 370 - -
Gma20g01761 537 MobiDBLite consensus disorder prediction 245 282 - -
Gma20g01761 537 PANTHER - 37 516 - -
Gma20g01761 537 MobiDBLite consensus disorder prediction 416 447 - -
Gma20g01761 537 CDD GT1 124 190 - -
Gma20g01761 537 Gene3D - 448 512 - -
Gma20g01761 537 Gene3D - 126 188 - -
Gma20g01761 537 Pfam Myb/SANT-like DNA-binding domain 446 517 IPR044822 -
Gma20g01761 537 Pfam Myb/SANT-like DNA-binding domain 124 211 IPR044822 -
Gma20g01761 537 ProSiteProfiles Myb-like domain profile. 124 183 IPR001005 -
Gma20g01761 537 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 37 516 - -
Gma20g01761 537 ProSiteProfiles Myb-like domain profile. 446 507 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01761 Gma-Chr20 44926064 44928595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01761 125 512 Trihelix Transcription Factor Family AT5G03680 42.786 1.36e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma20g01761 Myb_DNA-bind_4 4.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01761 - - gmx:100787750 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01950 10 46766643 46769254 Gma20g01761 20 44926064 44928595 GST