Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01754 ATGGAGGAAGGGGTGGATGCAGATGAAGTGGTGAGGTCAGTGAGCAGCTTGAGGATGAGCATAGGGTCTATGAGCAGGAGGAGTTGGGTTTCAGCAAGTGTTTCTGAGATGTGGGGTGCTGGACATGGTGGAGATGTTTTTGAAAGAAGCACTAGAGTGGATGATGGTGATAATGATGAAGAGGAGCTCATGTGGGCTGCCATAGAGAGGCTTCCAACATTTGAGAGGCTTAGGAAAAGCATAGTCAAAAGGGCTTTGGAAGAGAGTGGAAGGTTCAATTATGAAGAGGTTGATATATCCAATCTTGGTTTTCAGGACAAGAAGAAACTCCTTCATGCCATTCTAAGGAAGGTTGAAGTTGACAATGAAACATTTCTCCGTAGGATAAGGGAGAGGATTGATAGAGTCGCTATAGAGATTCCAAAAGTTGAAGTCCGATTTGAGCATTTGTTTGTGGAAGGAGATGCATTTAATGGAACCAGAGCACTGCCAACCTTAGTGAACTCCACCATGAATGCGATAGAGAGAATTCTTGGATCAATTAATCTTCTTCCATCAAAGAGAAGTGTTATCAAGATACTCCAAGATGTTAGTGGAATTGTCAAGCCTGCAAGATTGACCTTGCTTTTGGGGCCTCCAAGATCAGGAAAAACTACACTGCTGCAAGCACTTGCGGGGAAACTGGATAGGGATTTAAGGGTATCCGGAAGAGTCACTTACTGTGGTCATGAATTATCAGAATTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGCATAATCTTCATCATGGAGAGATGACAGTCCGAGAGACGTTGGACTTTTCTGGACGCTGCTTGGGAGTTGGAACAAGGCATGAACTACTACTAGAACTGATAAAGAGAGAAAAGCAATCAGGACTCAAACCAGATCCAGAGATAGATGCTTTCATGAAAGCCACAGCAGTGGAAGGTCAAGAAACAAGTCTCATTACAGATTATGTTCTCAAGGTTCTTGGATTGGAAATATGTGCTGATACTTTGGTAGGAGATGAGATGAGGAGAGGAATATCTGGTGGAGAAAAAAAGAGGTTAACTACTGGTGAGATGTTGGTAGGACCTGCAAAAGTTTTCTTAATGGATGAGATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAAGTTCTTGAGGCAGCTAGTGCATGTCATGGATGTTACAATGATAATCTCTCTTTTACAGCCTGCACCAGAAACATATGACCTTTTTGATGACATCATCTTGCTTTCAGAAGGCCACATTATCTACCAAGGTCCACGTGAGAATGTTCTCAATTTTTTTGAGAGTGTAGGCTTCAAATGCCCCGAAAGGAAAGGAGTTGCAGACTTCTTACAGGAGGTTACTTCCAGAAAGGAGCAAGAGCAGTACTGGTTCGCAAGGGACAAACCATACCGTTATGTCAGCGTGCCCGAGTTTGTAGCTCACTTCAACAATTTTGGCATTGGCCAACAACTTTCCCAAGATCTTCAGGTTCCTTATGACCGTGCCGAAACTCATCCTGCTGCATTGGTTAAAGATAAATATGGGATCTCAAAACTAGAACTCTTTAAGGCATGCTTTGCAAGAGAGTGGCTACTGATGAAGCGCAGTGCTTTCGTATACATATTTAAGACTACTCAGATTATGATAATGTCTTTGATTACCATGACAGTGTTTTTTAGGACAGAAATGAGAAGTGGTCACCTTGAAGATGGGAGAAAATATTATGGTGCACTGTTCTTTAGCCTCACTAATATAATGTTCAATGGAATGGCTGAGCTTTCATTGACTATTTTTAGACTTCCCGTTTTCTTCAAGCAGAGAGATTCATTATTTTTTCCAGCATGGGCTTTTGCAATTCCCATATGGATCTTTCGAATTCCTCTCTCTTTTGTGGAGTCAGGATTATGGGTTGTCCTTACTTATTACACAGTAGGGTATGCTCCAGCTCCAAGTAGATTTTTTCGTCAGTTATTAGCATTCTTCTGCTCTCATCAAATGGGTATGTCTCTGTTCCGATTCATTGCTGCTCTTGGAAGAACACTAGTTGTGGCAAACACATTTGGTTTCTTTGTACTGCTACTTGTTTATGTGCTTGGTGGGTTCATTATTGCCAAAGATAACCTTGAGCCTTGGATGAAATGGGGCTATTATATTTCTCCTATGATGTACGGTCAGAACGCCATTGCCATCAATGAATTTCTCGACGAGAGATGGAGCGCTGTAAGATCTTTAACATGTGGAAATTTTTTTCTATTTCATTTTCTTGCAAAACTGCATTCATTTATCTTCTTGCAGCCCAACACGGACCATAGAATTCCTGAGCCCACAGTTGGGAAGGCTCTTCTCAGGATTAGAAGCATGTTTACTGAAGACTATTGGTACTGGATTTCTATTGGTGCTCTACTAGGCTTTTCTCTGCTTTTCAACATTTGCTTTATAATTGCTCTTACATTTCTGAATCCATATGGAGATTCTAAATCTATTATTCTGGAGGAGGAGAATGAGAAAAAGGGAACTACAGAAGACAGTTCTGCTTCAACTGATAAATCATTTGAAAAAAAAAACACCCGAGAGAGTTCAATTCCCAAAGCAGGCACTGCAACAACCAAGAGGGGAATGGTGTTACCCTTCAAGCCTCTATCACTTGCTTTTGATCACGTGAATTACTACGTCAATATGCCAACTGAAATGGAAAAACATGGAGTTGAAGGGAGTCGGCTTCAACTACTAAGAGATGCCAGTGGTGCTTTCAGGCCTGGAGTACTAACAGCATTAGTAGGTGTAACTGGTGCTGGAAAAACCACATTGATGGATGTTCTAGCTGGACGGAAAACTGGTGGTTATATTGAAGGAAGCATCAGCATATCTGGTTACCCAAAAAAACAAGCAACTTTTGCTCGGATTAGTGGATATTGTGAACAAAATGATATCCATTCTCCACGTATCACAGTGTATGAATCTATTCTGTTTTCTGCTTGGCTGCGTCTTGGTAAGGAGGTCAAGAGAGAGATAAAGAAGATGTTTGTCGAGGAAGTTATGAACCTTGTTGAGCTACATCCAGTGAGAGATTTTCAAGTAGGCCTTCCTGGAATAGATGGTTTATCAACTGAACAAAGAAAGAGACTCACCATTGCAGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGATGAGCCAACCTCCGGCCTTGACGCTAGAGCTGCAGCAATTGTTATGCGTGCTGTTAGAAATACAGCGGATACAGGGAGAACTATTGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAATCTTTTGATGAGCTGCTTTTGATGAAGAGAGGAGGACAAATCATATATAATGGTCCCTTAGGTCAACAATCTCAGAATCTTATAGCCCACTTTGAGGCTTTCCCGGAAGTTCCTAGAATCAAAGATGGTTATAATCCTGCCACATGGGTTTTGGAGATCAGTACTCCAGCAGTTGAGAGTCAGCTTAGAGTAGACTTTGCAGAATTCTACACAAAATCAGAATTGTATCAGAGGAATCAAGAACTTATTAAAGAGCTAAGCACACCTTTAGAGGGAACAAAGGACCTTGATTTCCCTACTAAATACTCCCTTTCCTTTATCACTCAATGTATAGCTTGCTTCTGGAAACAGCACTTGTCCTACTGGAGGAATCCACAGTATAATGGCATCCGGTTATTCATGGCAATATCTATAGGTGTTATTTTTGGACTCATTTTCTGGAAAAAAGGAAACCAAACAGATACGGAGCAAGATCTTATGAATTTAATGGGAGCTATTTTTGCTGCTGTTTTCTTTCTTGGAGGCTCCAACACTTCCACTGTTCAACCCATAGTTGCAATTGAAAGAACAGTCTTCTACCGTGAAAGAGCAGCTGGAATGTACTCAGCTCTACCTTATGCAATTGCTCAGGTGGCAATAGAATGTATTTATGTTGCAATCCAGACATTTACCTTCAGTCTTATCCTTTTCTCAATGATGGGGTTCCTTTGGCGAGTTGACAAGTTCTTGTGGTTCTACTTCTTCATGTTCATTTCATTTGTCTACTTCACACTTTATGGCATGATGACTGCGGCTCTGACACCAAATCCTCAAATTGCTGCAATTGTTATGGCCTTCTTTCTAGTGTTTTGGAACGTATTCTCAGGTTTCATTATCCCAAAATCGCAAATTCCAATATGGTGGAGGTGGTTTTACTGGGTGTGTCCAACTGCCTGGAGTGTATATGGCCTAGTGACATCCCAGGTGGGTGACAAAGATACTCCTATTCTGGTACCTGGATCAGAACCAATGACAGTGAAAGCATTCCTTGAGGAAGAGTTCGGCTATGAATATGGCTTCCTCGGAGTTGTTGCTGTGGCTCATATTGCATTTGTTGCATTGTTTCTTTTTGTTTTTGCATATGGTATCAAAGTCTTTAATTTCCAGAAGAGATAA 4479 0.411 MEEGVDADEVVRSVSSLRMSIGSMSRRSWVSASVSEMWGAGHGGDVFERSTRVDDGDNDEEELMWAAIERLPTFERLRKSIVKRALEESGRFNYEEVDISNLGFQDKKKLLHAILRKVEVDNETFLRRIRERIDRVAIEIPKVEVRFEHLFVEGDAFNGTRALPTLVNSTMNAIERILGSINLLPSKRSVIKILQDVSGIVKPARLTLLLGPPRSGKTTLLQALAGKLDRDLRVSGRVTYCGHELSEFVPQRTCAYISQHNLHHGEMTVRETLDFSGRCLGVGTRHELLLELIKREKQSGLKPDPEIDAFMKATAVEGQETSLITDYVLKVLGLEICADTLVGDEMRRGISGGEKKRLTTGEMLVGPAKVFLMDEISTGLDSSTTFQIVKFLRQLVHVMDVTMIISLLQPAPETYDLFDDIILLSEGHIIYQGPRENVLNFFESVGFKCPERKGVADFLQEVTSRKEQEQYWFARDKPYRYVSVPEFVAHFNNFGIGQQLSQDLQVPYDRAETHPAALVKDKYGISKLELFKACFAREWLLMKRSAFVYIFKTTQIMIMSLITMTVFFRTEMRSGHLEDGRKYYGALFFSLTNIMFNGMAELSLTIFRLPVFFKQRDSLFFPAWAFAIPIWIFRIPLSFVESGLWVVLTYYTVGYAPAPSRFFRQLLAFFCSHQMGMSLFRFIAALGRTLVVANTFGFFVLLLVYVLGGFIIAKDNLEPWMKWGYYISPMMYGQNAIAINEFLDERWSAVRSLTCGNFFLFHFLAKLHSFIFLQPNTDHRIPEPTVGKALLRIRSMFTEDYWYWISIGALLGFSLLFNICFIIALTFLNPYGDSKSIILEEENEKKGTTEDSSASTDKSFEKKNTRESSIPKAGTATTKRGMVLPFKPLSLAFDHVNYYVNMPTEMEKHGVEGSRLQLLRDASGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQATFARISGYCEQNDIHSPRITVYESILFSAWLRLGKEVKREIKKMFVEEVMNLVELHPVRDFQVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTADTGRTIVCTIHQPSIDIFESFDELLLMKRGGQIIYNGPLGQQSQNLIAHFEAFPEVPRIKDGYNPATWVLEISTPAVESQLRVDFAEFYTKSELYQRNQELIKELSTPLEGTKDLDFPTKYSLSFITQCIACFWKQHLSYWRNPQYNGIRLFMAISIGVIFGLIFWKKGNQTDTEQDLMNLMGAIFAAVFFLGGSNTSTVQPIVAIERTVFYRERAAGMYSALPYAIAQVAIECIYVAIQTFTFSLILFSMMGFLWRVDKFLWFYFFMFISFVYFTLYGMMTAALTPNPQIAAIVMAFFLVFWNVFSGFIIPKSQIPIWWRWFYWVCPTAWSVYGLVTSQVGDKDTPILVPGSEPMTVKAFLEEEFGYEYGFLGVVAVAHIAFVALFLFVFAYGIKVFNFQKR 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01754 1492 CDD ABCG_PDR_domain2 888 1126 IPR034003 -
Gma20g01754 1492 Pfam ABC-2 type transporter 409 461 IPR043926 GO:0140359
Gma20g01754 1492 Pfam ABC-2 type transporter 530 742 IPR013525 GO:0016020|GO:0140359
Gma20g01754 1492 Pfam ABC-2 type transporter 1216 1428 IPR013525 GO:0016020|GO:0140359
Gma20g01754 1492 Pfam Plant PDR ABC transporter associated 781 838 IPR013581 -
Gma20g01754 1492 Gene3D - 905 1138 IPR027417 -
Gma20g01754 1492 Pfam ABC transporter 920 1071 IPR003439 GO:0005524
Gma20g01754 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 915 1131 IPR027417 -
Gma20g01754 1492 Gene3D - 183 481 IPR027417 -
Gma20g01754 1492 SMART AAA_5 928 1120 IPR003593 -
Gma20g01754 1492 SMART AAA_5 203 428 IPR003593 -
Gma20g01754 1492 Pfam ABC-transporter N-terminal 119 168 IPR029481 -
Gma20g01754 1492 CDD ABCG_PDR_domain1 175 433 IPR034001 -
Gma20g01754 1492 MobiDBLite consensus disorder prediction 844 868 - -
Gma20g01754 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 178 451 IPR003439 GO:0005524
Gma20g01754 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 451 IPR027417 -
Gma20g01754 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 891 1144 IPR003439 GO:0005524
Gma20g01754 1492 Pfam ABC transporter 194 376 IPR003439 GO:0005524
Gma20g01754 1492 MobiDBLite consensus disorder prediction 844 874 - -
Gma20g01754 1492 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 774 1492 - -
Gma20g01754 1492 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 12 750 - -
Gma20g01754 1492 PANTHER ATP-BINDING CASSETTE TRANSPORTER 774 1492 - -
Gma20g01754 1492 PANTHER ATP-BINDING CASSETTE TRANSPORTER 12 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01754 Gma-Chr20 44860392 44873521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01754 916 1103 Calmodulin-binding Proteins AT2G36910 28.000 1.23e-06 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01957 10 46821823 46837072 Gma20g01754 20 44860392 44873521 GST