Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01753 ATGCACTCCTCCGCCGAGGAAGACTCCGACAACTCCGCCACAACCGCCACCGCCAGCACGGAGTGGACGTTCTCCGCCAAGTCCCACGCACCCTCCTCGGACCCCTCCTGGGACGCCATACAGCGCGGCGGCGGCGCCACCCTGGCACTCGGCGACCTCCGGTTCGTGCAGCGCGTGGGGAGTGGCGACATCGGAAGCGTCTACTTGGTGGAGCTCAAGGGCTCCAGCGGGTGCCTCTTCGCGGCGAAGGTGATGGACAAGAAGGAACTCGTGGCCAGGAACAAAGACACGAGGGCAAAGGTTGAGAGAGAGATATTGCAAATGGTGGATCATCCTTTTTTGCCCACTCTTTATGCTTCTCTCGATTCGCCGCGCTGGTCTTGCCTCCTCACCGAGTTCTGCCCCGGCGGCGACCTCCACGTCCTCCGCCAGCGCCAGCCCGATAAACGCTTCCACCTCGCCGCCGTCAGGTTCTATGCATCTGAAGTTGTGGTTGCGTTGGAGTACCTACACATGATGGGGATAATATACCGTGATTTGAAGCCTGAAAACGTGCTCATAAGATCAGACGGTCACATTATGCTAACAGACTTTGACCTCTCATTAAAAGGTGACGATACCGCATCAACGGCTCAGATGGTGTTTGATGAAGATCCACCCAGCAACACCTGTTCTAAGGAACATTCGAGGAAGCAATGCACTCCCACCATGTCATCATGCATGCTGCCCAATTGCATCGTGCCATCTGTCCCATGCTTCCACCCAAAACGGGGTCGTAGCAAGAGGTTCTCTCGTTGTGGGTCCCTTGAGATCATAGCTGAGCCAATAGAAATTCGATCAACGTCGTTCGTTGGGACCCACGAGTACTTGGCGCCAGAAGTGATTTCGGGGGAGGGTCATGGTAATGCTGTTGATTGGTGGACCTTGGGAGTGTTCATTTTTGAAATGTTCTATGGGATCACACCCTTTAAAGGGCTTGAGAATGAGTTAACCCTAGCTAACATTGTAGCTCGAGCCCTTGAGTTCCCTAAGGAGCCAATGATCCCTGGACCAGCCAGGGATTTGATCTCACAACTTTTGGTCAAGGACTCAACAATGAGACTAGGGTCTACAATGGGTGCCCTGGCAATTAAGCACCATCCATTTTTCAATGGCGTCAATTGGCCATTGTTGAGGTGTGCTACCCCTCCTTACATCCCTTCATCAGACAAGTGCAAGGAGTTGCTTCCTCTCTATAATTGCACAAACAATGCTATAGACTTCTATTAG 1269 0.5319 MHSSAEEDSDNSATTATASTEWTFSAKSHAPSSDPSWDAIQRGGGATLALGDLRFVQRVGSGDIGSVYLVELKGSSGCLFAAKVMDKKELVARNKDTRAKVEREILQMVDHPFLPTLYASLDSPRWSCLLTEFCPGGDLHVLRQRQPDKRFHLAAVRFYASEVVVALEYLHMMGIIYRDLKPENVLIRSDGHIMLTDFDLSLKGDDTASTAQMVFDEDPPSNTCSKEHSRKQCTPTMSSCMLPNCIVPSVPCFHPKRGRSKRFSRCGSLEIIAEPIEIRSTSFVGTHEYLAPEVISGEGHGNAVDWWTLGVFIFEMFYGITPFKGLENELTLANIVARALEFPKEPMIPGPARDLISQLLVKDSTMRLGSTMGALAIKHHPFFNGVNWPLLRCATPPYIPSSDKCKELLPLYNCTNNAIDFY 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01753 422 PANTHER FLIPPASE KINASE 1-RELATED 8 422 - -
Gma20g01753 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Gma20g01753 422 PANTHER PROTEIN KINASE G11A-LIKE 8 422 - -
Gma20g01753 422 MobiDBLite consensus disorder prediction 1 38 - -
Gma20g01753 422 SUPERFAMILY Protein kinase-like (PK-like) 45 400 IPR011009 -
Gma20g01753 422 ProSiteProfiles Protein kinase domain profile. 53 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01753 422 MobiDBLite consensus disorder prediction 8 35 - -
Gma20g01753 422 SMART serkin_6 53 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01753 422 Gene3D Phosphorylase Kinase; domain 1 52 137 - -
Gma20g01753 422 Gene3D Transferase(Phosphotransferase) domain 1 138 214 - -
Gma20g01753 422 CDD STKc_phototropin_like 52 400 - -
Gma20g01753 422 Gene3D Transferase(Phosphotransferase) domain 1 279 401 - -
Gma20g01753 422 Pfam Protein kinase domain 55 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01753 422 Pfam Protein kinase domain 280 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01753 Gma-Chr20 44835821 44838936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01753 55 422 AGC Kinase Gene Family AT3G44610 62.827 1.34e-174 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma20g01753 Pkinase 1.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01753 K08286 - gmx:100786154 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01958 10 46858210 46860906 Gma20g01753 20 44835821 44838936 GST