Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01726 ATGGCGAGGATCAAACCTCAGGCTCTGCTACAGCAAAGCAAAAGGAAGAAGGGTCCTTCTCGGATAAGTGCCGTGACTGTTATATTTTACTTTTTGATTCTTGCCTTGGTTGGGTTTTTCCTGTTTGCTTCGTACAGACATTGGTCCAGCAGATCAAGATTACAATCCGAAGATCACTTGTCAGTCTCCGAGGGTGAAAATACTTTTGTGGACTCCAAGAAATCTGAGCTGCCTGGATATGCTGTTTTAAATACCTCTAAAGGTTCTATAATAATAGAACTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGTCAAAAAGGACACTTCAAGGGGATGCTTTTTCACAAAGTAATTAAGCACTATGTGATTCAGGCAGGGGATAACCAAGGATCTGGAGCTACTGAAGATTGGAACTTGAGAGGAAAGCAACATACAATTACTAGTATGAAACATGAAGCATTCATGCTTGGAACTTCCAAGGGCAAACACAACAACAAAGGATTTGATCTTTTCATTACAACTGCACCGATACCAGATTTAAATGAGAAAATTATTGTGTTTGGGCAAGTCATCAAGGGAGAGGATGTTGTGCAGGAAATTGAAGAAGTGGATACAGATGAACATTACAAGCCTAAAGTATCTATCGGGATACTTGATGTGACTCTTAAACAGAAGGTCTGA 699 0.3977 MARIKPQALLQQSKRKKGPSRISAVTVIFYFLILALVGFFLFASYRHWSSRSRLQSEDHLSVSEGENTFVDSKKSELPGYAVLNTSKGSIIIELYKESAPEVVDEFIDLCQKGHFKGMLFHKVIKHYVIQAGDNQGSGATEDWNLRGKQHTITSMKHEAFMLGTSKGKHNNKGFDLFITTAPIPDLNEKIIVFGQVIKGEDVVQEIEEVDTDEHYKPKVSIGILDVTLKQKV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01726 232 CDD cyclophilin 82 225 - -
Gma20g01726 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Gma20g01726 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Gma20g01726 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 175 187 IPR002130 GO:0000413|GO:0003755
Gma20g01726 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 188 203 IPR002130 GO:0000413|GO:0003755
Gma20g01726 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 232 - -
Gma20g01726 232 SUPERFAMILY Cyclophilin-like 78 228 IPR029000 -
Gma20g01726 232 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 228 IPR002130 GO:0000413|GO:0003755
Gma20g01726 232 Gene3D - 66 232 IPR029000 -
Gma20g01726 232 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 226 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01726 Gma-Chr20 44522702 44526678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01726 79 228 U-box Gene Family AT5G67530 30.519 3.91e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01726 - - gmx:100781538 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01985 10 47164388 47173040 Gma20g01726 20 44522702 44526678 GST