Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01725 ATGACTGAAGAAAGTGCTGGAAACACAGTTGCAACCTCTATTACCCCATTCAATTGGTGGTATCTCCAGGCAAATTCTCTTTCTTCCTGGAACGATACTAATAGCACATGGAACAGCCAACCAAACCCTAATTCTTCCTCTTCTTGTGAGGAGGATATATCTGTTTCTACATCTTTCACTAATGCTTCCAACCATTCAAGCCTCACTGTTGAGTCCTCTCGCAGACTCATTGAGCCACCTGCTCCTTCCTCCAACGAGTTGATGGGAGAACATGCTTCAGATAATCAACTTTGGAGTCATGTTTTATCAGGTGTTGGATCAAACGGCGAGTTGCACAACGGCCAAGAAATTGGAGAGAACTTTCTGGATGCACTGTCATCCAAAAGCATGACAAGCACTATGTTTCAACCAGTGTGTGACTACTTGAAGAAACTTGATCATACAAGTTGGGAATATAATGGTCCAACTTCATTAAATAGCTTTGAGAAGCACTTAAATGGGTTCAGTGAGGCGATGATTGAGAATAATGAAAGGTTGACCAAGTTATCCAATCTTGTAAGCACTTGGTCTATTGCTCCACCAGACCCAGAAGTTAGTAGCCACTTTGATCCACAAACAAACAACATGTCCTTGAGTTCTAATTCCATGGATCATCACTTCCCACAATCTGAACACTTCAAGCAACCTTTTAGAGACTCCACATCATCATGCTCTCTTGGAGGAGCAAGTAGAAGTTCTGGAGTGATTCCTAATTGCTATGATCATGACATGAAGGTGAAGCAAGAGTATCATGCAAGTGAAGTGCCACCAGGAGCAGTATTTGGAAAAACATTGAATGCCAATGGATTCAATAGCCTTTCAGTGGGTGATAGTTGCAAACTCTACCATGGTATGCCCAATATTTCTTCATGCACAAGAAATTTCTCAGATGTTATATCCTTTAATAGTAGATTGGGAAGGCCAGTTATTGGAGTCCATAGTCAAAAGCCTAGTATGAAGTACCTGAACGTATCTGAATCAAAGAAGCAAGGTCTTCAAACACCATCACCACCGATAAGAACTAATGTTAATGGAAAAGGGGAGGGGACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGATGCAATGTTGAAAAAACCTAAGCAAGATACATCAACAGCTTCTTCTTCAAAGGTGCAGGCACCCAAAGTCAAGCTAGGGGACAAAATTACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACAGATACAGCATCTGTGCTGTTTGAAGCAATAGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTATTTGAAGGCTAACACTCACAAGGACCCATGGGGAAGCTTGGATAGAAAAGATAAGGAGGACACCAAGTTAGACCTTCGGAGCAGAGGTCTATGTTTAGTTCCTACTTCATGTACTCCTCTAGTTTACAGAGACAGCAGTGGACCAGATTACTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1524 0.4173 MTEESAGNTVATSITPFNWWYLQANSLSSWNDTNSTWNSQPNPNSSSSCEEDISVSTSFTNASNHSSLTVESSRRLIEPPAPSSNELMGEHASDNQLWSHVLSGVGSNGELHNGQEIGENFLDALSSKSMTSTMFQPVCDYLKKLDHTSWEYNGPTSLNSFEKHLNGFSEAMIENNERLTKLSNLVSTWSIAPPDPEVSSHFDPQTNNMSLSSNSMDHHFPQSEHFKQPFRDSTSSCSLGGASRSSGVIPNCYDHDMKVKQEYHASEVPPGAVFGKTLNANGFNSLSVGDSCKLYHGMPNISSCTRNFSDVISFNSRLGRPVIGVHSQKPSMKYLNVSESKKQGLQTPSPPIRTNVNGKGEGTTREVKKKRSEESSDAMLKKPKQDTSTASSSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKANTHKDPWGSLDRKDKEDTKLDLRSRGLCLVPTSCTPLVYRDSSGPDYWTPAYRGCLYR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01725 507 Gene3D - 399 454 IPR036638 GO:0046983
Gma20g01725 507 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 493 - -
Gma20g01725 507 PANTHER TRANSCRIPTION FACTOR BHLH111 31 493 - -
Gma20g01725 507 MobiDBLite consensus disorder prediction 362 381 - -
Gma20g01725 507 CDD bHLH_AtbHLH_like 401 443 IPR045239 -
Gma20g01725 507 MobiDBLite consensus disorder prediction 338 361 - -
Gma20g01725 507 MobiDBLite consensus disorder prediction 338 397 - -
Gma20g01725 507 MobiDBLite consensus disorder prediction 382 396 - -
Gma20g01725 507 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 386 435 IPR011598 GO:0046983
Gma20g01725 507 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 401 452 IPR036638 GO:0046983
Gma20g01725 507 MobiDBLite consensus disorder prediction 32 73 - -
Gma20g01725 507 MobiDBLite consensus disorder prediction 32 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01725 Gma-Chr20 44506089 44509400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01725 23 507 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 33.268 3.23e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01725 - - gmx:100527800 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01986 10 47191533 47194886 Gma20g01725 20 44506089 44509400 GST