Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01724 ATGAAAAGAAAGGGCAGGAGTTGTGACAACCAAGATGCCGTGAACAGAGGTCCTTGGTCTGCTGAGGAAGACCAAATACTCATCAACTACGTTCAAGTCCATGGAGAAGGAAATTGGAGAGAGCTTTCCAAAAGAGCTGGCTTGAAAAGATGTGGGAAGAGTTGTAGACTCCGATGGCTGAATTATCTCAAGCCAGATATCAAGAGAGGAAACATTTCTTCGGATGAAGAAGATCTCATTATTAGACTGCATAAGCTCTTAGGGAATAGATGGTCTCTAATTGCGGGACGCTTACCAGGGCGAACAGACAATGAAATTAAGAACTATTGGAATACTTATTTGAGAAAGAAGGCAGAGCACAAGCATGACAAAATTCCTAGCCATAACGATAACATTCCTATCAAATTAAGAATTGAATCTCCGGGTTGCTCAAAAAATTCCTTTGGTAATGTTCTTGATCCTACAAAATCCCCTCACCCAATGAGGTGTACCAAGGTTATGATGCCAGTCAATGATTCAGTCAACACAACGAATTTGATTACAACGAGCTGGGACAATCATAACCCTTCTTCTGCATCCATGCAACTAGATGACTATAATCATTGCTTAACAGGTGTCCTCCAAGAATTTGACATCAGTGACTTGTTAATGTCGTATGAGGATGATTTTCGTTTTAATGGATATGCTTGTGTCGAAATACCCCAACATATTTTTGAAGATGAGACTTGCAGGCTTGATGATTCGTTGGGTGAAGAAGCATGGTATGAGAATTGGAAGAATGACCCCTATTTTCCACAAGATCAAGATATGGGTTTTTCTTCCTTTTAA 828 0.401 MKRKGRSCDNQDAVNRGPWSAEEDQILINYVQVHGEGNWRELSKRAGLKRCGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKAEHKHDKIPSHNDNIPIKLRIESPGCSKNSFGNVLDPTKSPHPMRCTKVMMPVNDSVNTTNLITTSWDNHNPSSASMQLDDYNHCLTGVLQEFDISDLLMSYEDDFRFNGYACVEIPQHIFEDETCRLDDSLGEEAWYENWKNDPYFPQDQDMGFSSF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01724 275 CDD SANT 73 114 IPR001005 -
Gma20g01724 275 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 274 - -
Gma20g01724 275 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 274 - -
Gma20g01724 275 SUPERFAMILY Homeodomain-like 15 110 IPR009057 -
Gma20g01724 275 SMART sant 15 65 IPR001005 -
Gma20g01724 275 SMART sant 68 116 IPR001005 -
Gma20g01724 275 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Gma20g01724 275 Gene3D - 72 134 - -
Gma20g01724 275 CDD SANT 18 63 IPR001005 -
Gma20g01724 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Gma20g01724 275 Gene3D - 16 68 - -
Gma20g01724 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Gma20g01724 275 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Gma20g01724 275 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Gma20g01724 275 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01724 Gma-Chr20 44485203 44497118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01724 1 117 MYB Transcription Factor Family AT3G13540 68.376 2.76e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma20g01724 Myb_DNA-binding 2.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01724 K09422 - gmx:100780809 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01987 10 47213856 47223348 Gma20g01724 20 44485203 44497118 GST