Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01706 ATGAATAACTCTGTTTCAGAAAACAGTTTCATCATTGAGAGTGATGAAGAAGATGAGGAGAAGGATTTGAATAAAGGTGGAGTTGATGGAAACGATTCTGATTCTTCCAATTACTCAAATGAAAACCCTCCACAGCGAAAGCCCAGTTCTTACAACATTTCATGGCCTCAGAGTTACAGGCAATCTATTGATCTATATAGTAGTGTGCCATCACCAAACATTGGATATTTGGGCACACCTTCTCTGTCAAGACTAAGCAGTTCTTTTCTTTCTACATCATTGACAAGGAGGCACACTCCTGAAGCACTTCCTTCAGTGGCAAAGCCTCTGATACAAGACACAGAAGATGAGCAGCATCAGAGACGTAGCTCTCACACCTTGCTTCCTCCTCTTCCTTCTAGAAGGTCTTCTTTGATTAAGAAGGATTCCAAGGTTATTCATCATGAAGTTCCCTCTGGCCACTGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGTTCTTTGTGGTGTTGGAATCCTTTCTACACCTTATGCTGCCAAAGTAGGTGGATGGCTTGGGCTTTCTATATTGGTCATTTTTGCAATTATTTCATTTTATACTGGGCTGCTTTTGCGTTCCTGCTTGGACAGTGAACCTGAGCTTGAGACATACCCTGATATTGGCCAAGCTGCTTTTGGTACTACTGGACGTATTGCCATTTCAATAGTATTATACGTGGAATTATATGCTTGTTGCATTGAATATATAATTTTGGAGGGCGACAATTTGTCTTCCTTATTTCCAAGTGCACACTTAAATTTGGGTGGAATTGAACTGAATTCACATACATTGTTTGCTGTGATTACTACCTTGGCTGTTCTTCCTACTGTTTGGCTCCGTGACCTAAGTATTCTAAGTTACATATCTGCTGGTGGAGTTGTTGCATCAATTTTAGTGGTTCTCTGCCTATTATGGGTTGGCATAGAGGACGTAGGCTTTCATAGCAAAGGGACCACACTCAATCTTGCAACTCTTCCTGTTGCTGTTGGTCTTTATGGTTACTGCTACTCTGGACATGCTGTGTTCCCAAACATTTATACATCCATGGCAAATCCAAACCAATTCCCTGGAGTCCTCTTAGCATGTTTTGGAATTTGTACCTTGTTGTATGCTGGAGCTGCTGTATTGGGATACACAATGTTTGGAGAAGCTATTCTGTCTCAGTTCACTCTTAACATGCCTAAAGAATTGGTAGCAACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAGTATGCGTTGACTATATCCCCAGTGGCAATGAGTCTGGAGGAGTTGATACCATCAAACCATGCCAAGTCTTATCTATATTCCATCTTCATCAGAACAGGGTTGGTACTTTCTACCCTGGTTATTGGTCTCTCAGTTCCCTTTTTTGGTCTGGTGATGTCATTGATTGGATCATTACTCACAATGCTTGTTACTTTGATACTACCCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTTGGATCATACTCCGCCCTTGCCGAGATTGTGAAGAGTTTGAGGGGATGA 1635 0.4171 MNNSVSENSFIIESDEEDEEKDLNKGGVDGNDSDSSNYSNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGYLGTPSLSRLSSSFLSTSLTRRHTPEALPSVAKPLIQDTEDEQHQRRSSHTLLPPLPSRRSSLIKKDSKVIHHEVPSGHCSFGQAVLNGINVLCGVGILSTPYAAKVGGWLGLSILVIFAIISFYTGLLLRSCLDSEPELETYPDIGQAAFGTTGRIAISIVLYVELYACCIEYIILEGDNLSSLFPSAHLNLGGIELNSHTLFAVITTLAVLPTVWLRDLSILSYISAGGVVASILVVLCLLWVGIEDVGFHSKGTTLNLATLPVAVGLYGYCYSGHAVFPNIYTSMANPNQFPGVLLACFGICTLLYAGAAVLGYTMFGEAILSQFTLNMPKELVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSNHAKSYLYSIFIRTGLVLSTLVIGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGKVTRTQAALCITIITVGVVCSAFGSYSALAEIVKSLRG 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01706 544 MobiDBLite consensus disorder prediction 113 135 - -
Gma20g01706 544 MobiDBLite consensus disorder prediction 29 53 - -
Gma20g01706 544 Pfam Transmembrane amino acid transporter protein 156 533 IPR013057 -
Gma20g01706 544 PANTHER - 26 541 - -
Gma20g01706 544 PANTHER OS05G0424000 PROTEIN-RELATED 26 541 - -
Gma20g01706 544 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01706 Gma-Chr20 44238100 44245649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01706 1 477 Amino Acid or Auxin Permease AAAP Family AT2G39130 69.278 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01706 K15015 - gmx:100775840 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01706 20 44238100 44245649 Gma20g01706 20 44238100 44245649 ECH
Gma10g02004 10 47492797 47501549 Gma20g01706 20 44238100 44245649 GST