Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01701 ATGTGTAGGTGGAGCATTAAGTCAATGCATTTGAGGGTGCCCATTGTGGTGTTGAGCTTGTTCCTTGGGATGATGCAGTTGCCGTGCCAAGAAGTGAATGACTATGACCAAATCGATAGCCCTGCTGTTCTTCCCCTCGTTACTCAGCTTGTCTATAGTCAAATCTCCAATTTGACATCAATACTCAGTCAGGAAATAAGCAAAGAGTCCACTTTTTGTATCAAAGATCCggatgctgattggaatcaagcatttaatttttcATCTGATTTGGGCTTCTTGGCGTCTTGCATTAAGAAGACTAGAGGAGATATTGCAAAACGTTTGTGTACAGCAGCAGAAGTGAGGTTTTTCTTAAATAGTTTGTTGGGAAAATCTGTAAGTGCCAATTATTTAAAGCCTAACAAGAACTGCAATTTAACGTCATGGGTCTCTGGTTGTGAGCCAGGATGGGCCTGTAGTGTTCCCTCAAGCCAGAAGGTTGACCTTAAAAACTCAAAGGAGATACCTGCAAGAACTTCGAATTGTCAAGCATGTTGTGAAGGCTTCTTTTGTCCTCATGGGATTACATGCATGATACCATGCCCTTTAGGTTCTTATTGCCCTCTTGCTACATTGAATAAAACAACTGGCATTTGTGAACCATATCTTTATCAGCTGCCTCCAATGCAGCCAAACCATACCTGTGGTGGAGCAAATGTTTGGGCTGATGTTAGTAGCAGTAGTGAGATATTTTGCTCAGCTGGATCATACTGCCCAACAACAACAAAAAGAATTCCTTGCAGTAGTGGGCATTATTGCAGGATGGGCTCCACATCTGAGAAAAGATGCTTCAAGTTGAGTTCATGTAATTCAAACACAGCAACCCAAAATATGCATGCATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAATTGTTCTGACCAAGTTCTAACTACTAGGGAAAGAAGAGTGGCCAAATCTAGAGAAGCAGCAGCTAGAAGTGCAAGGAAGACTGCAAATGCACGCCAAAGATGGCAATTTGCAAAAGATGCCACTAAGAAGGGTGCAATGGGGCTGCAAGCTCAGCTATCACGCACCTTCAAGAAGGATGTGGCAAATCTGGAAAAAGTTAAAATTTTGAATCAAGCAACTTCTGAAGCAGATATTGAATTGTTGTCACATTCAGGACCTACAACTTCAAGCATGGTTGCAAGTTCATCTCTGGCGCCAAAGGAAAAGGGAAAAGAACCTAATGGTCTTATGCAGATAATACATGAAATTGAAAATGATCCAGATATTAATGACCACCTTCATACAGAAATAGAAACCAGAGATACAGGTGTTAGAGCAAATGCGCCAAAGGGAAAACAACCACATACTCATAGCCAAATTTTTAAGTATGCATATTCTCAACTTGAAAAAGAGAAGGCTGAGCAACAAGAAAACAAGAAGCTTACCTTCTCGGGGGTAATTAAAATGGCTACAAACACTGAAAAAAGGAAAAGGCCTTTAATGGAGATTTCTTTCAAGGATCTGACTCTTACATTGAAAGCTCAAAACAAACACATATTGAGATATGTTACTGGGAAAATTAAACCTGGCCGCATCACTGCTGTCATGGGTCCATCAGGGGCTGGCAAGACAACATTTCTTTCAGCTCTAGCCGGAAAGGCATTGGGATGCTCAGTCACTGGTTCAATTTTTATAAATGGAAGGAATGAATCAATCCACTCCTTTAAGAAAATTACTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACCTAACAGTGGAAGAGAATCTCTGGTTCAGTGCACAGTGCAGGCTATCTGCTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTTGAAAGAGTTATAGAATTCTTGGGGCTTCAATCTGTGCGCAATGCCTTGGTTGGAACTGTGGAAAAAAGAGGGATCTCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGATTGGAAATGGTTATGGAACCTTCGCTCTTGATCTTGGATGAACCCACATCTGGCTTGGACAGTGCATCATCTCAGCTCCTTCTAAGAGCACTAAGACGCGAAGCTCTTGAGGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTTCAAGATGTTTGATGACCTGATACTTCTGGGAAAAGGTGGTCTTACTGTCTATCATGGATCTGCCAAGAAAGTTGAAGAATACTTTTCAGGTCTGGGGATCAATATTCCGGAGCGGATTAATCCTCCTGATTACTTCATTGACATTTTGGAGGGCATAACAACACCTGGTGGAAGCTCAGGACTCAGTTATAAAGAGCTGCCAGTTAGATGGATGCTTCATAATGGATATCCAATTCCTCTTGATATGAGGCAGAATGCAGTTCAATTTGATATGTCCCAGAGTGTAAATTCAGCTAATGAAATAGATCCCAATGGATCTGGTCATGTCGGTAAAACCTTTGCCGGAGAGTTATGGCAAGATATGAGAAACAATGTGGAACTGAAGAGGGAGAAGATAAGACTCAATTTTTTTAAATCCAAGGATTTATCTAACCGGAAAACTCCTGGTGTTTTCAAGCAATATAAGTACTTTCTTATACGGGTTGGGAAGCAGCGACTACGAGAAGCTAGGATCCAAGCCATTGATTATCTTATTTTGTTACTTGCTGGAGCCTGCTTAGGATCACTTACCAAATCAGGTGACCAAACATTTGGTGCAGCTGGGTACACCTATACGGTGATTGCTGTATCTCTTCTGTGCAAAATAGCGGCCTTGAGATCATTTTCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCTTATTTCCTCTCCAAAGACACAATTGATCTTTTCAATACACTGATCAAGCCTGTGGTGTATCTTTCTATGTTCTATTTCTTCACCAATCCGATATCAACTTTTGCAGATAATTATGTTGTGCTGCTTTGTCTTGTATACTGTGTCACTGGCATAGCCTATGCATTGTCCATATTTTTTGAACCTGGCGCAGCCCAGCTGTGGTCAGTACTTCTGCCAGTTGTTTTGACTCTCATTGCAACACAACCAAAAGATAGTAAAGTGTTGAAGAATATAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTAGTTGTTGCAAATGCTGAAAGGTATCAGGGAGTGTGGCTCATAACTCGTTGTGGTTCACTTTTGAAAAGTGGCTACAATCTTCATGATTGGAGTTTGTGCATATCCATACTCATTCTTATGGGTGTAATTGCCCGGGCTATAGCATTTTTCTGTATGGTCACCTTCCGAAAGAAGTAA 3348 0.4092 MCRWSIKSMHLRVPIVVLSLFLGMMQLPCQEVNDYDQIDSPAVLPLVTQLVYSQISNLTSILSQEISKESTFCIKDPDADWNQAFNFSSDLGFLASCIKKTRGDIAKRLCTAAEVRFFLNSLLGKSVSANYLKPNKNCNLTSWVSGCEPGWACSVPSSQKVDLKNSKEIPARTSNCQACCEGFFCPHGITCMIPCPLGSYCPLATLNKTTGICEPYLYQLPPMQPNHTCGGANVWADVSSSSEIFCSAGSYCPTTTKRIPCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMHAYGIMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAARSARKTANARQRWQFAKDATKKGAMGLQAQLSRTFKKDVANLEKVKILNQATSEADIELLSHSGPTTSSMVASSSLAPKEKGKEPNGLMQIIHEIENDPDINDHLHTEIETRDTGVRANAPKGKQPHTHSQIFKYAYSQLEKEKAEQQENKKLTFSGVIKMATNTEKRKRPLMEISFKDLTLTLKAQNKHILRYVTGKIKPGRITAVMGPSGAGKTTFLSALAGKALGCSVTGSIFINGRNESIHSFKKITGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNALVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLGKGGLTVYHGSAKKVEEYFSGLGINIPERINPPDYFIDILEGITTPGGSSGLSYKELPVRWMLHNGYPIPLDMRQNAVQFDMSQSVNSANEIDPNGSGHVGKTFAGELWQDMRNNVELKREKIRLNFFKSKDLSNRKTPGVFKQYKYFLIRVGKQRLREARIQAIDYLILLLAGACLGSLTKSGDQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDLFNTLIKPVVYLSMFYFFTNPISTFADNYVVLLCLVYCVTGIAYALSIFFEPGAAQLWSVLLPVVLTLIATQPKDSKVLKNIANLCYSKWALQALVVANAERYQGVWLITRCGSLLKSGYNLHDWSLCISILILMGVIARAIAFFCMVTFRKK 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01701 1115 Pfam ABC transporter 527 677 IPR003439 GO:0005524
Gma20g01701 1115 Gene3D - 506 743 IPR027417 -
Gma20g01701 1115 Pfam ABC-2 type transporter 706 1115 IPR043926 GO:0140359
Gma20g01701 1115 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 508 749 IPR003439 GO:0005524
Gma20g01701 1115 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 1112 - -
Gma20g01701 1115 SMART AAA_5 534 726 IPR003593 -
Gma20g01701 1115 ProSitePatterns ABC transporters family signature. 649 663 IPR017871 GO:0005524
Gma20g01701 1115 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 36 1112 - -
Gma20g01701 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 508 741 IPR027417 -
Gma20g01701 1115 MobiDBLite consensus disorder prediction 396 416 - -
Gma20g01701 1115 CDD ABCG_EPDR 506 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01701 Gma-Chr20 44198063 44206036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01701 532 727 Calmodulin-binding Proteins AT2G36910 24.651 9.17e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01701 - - gmx:100775464 2162.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01491 02 25674779 25699263 Gma20g01701 20 44198063 44206036 ECH
Gma20g01701 20 44198063 44206036 Gma20g01701 20 44198063 44206036 ECH
Gma10g02007 10 47529699 47537860 Gma20g01701 20 44198063 44206036 GST