Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01698 ATGTGCAAATCCAAAAAGAGCACAAGCGTGATCCAACCCAGAACCCGAACAAACACAAAAACGACAAATTCCCCTCGTCCTCACCGAACACGAACCCCAACATCGTCTTCCTCGAACTACGAAACCTCCACGAGCGATGTTCCAATCACAGAATCAAGAAGCTACGTATTCGAAAACAACAACAACTCCAACACCAACTACGACTTCGAGTGGTCCAAAACCTCTTCAATTTCAAGCCGCGCTTCTCTATCAAGTCTCAGAGACACGCTCCCTGAAAACCCTAACATCTACCACTTCTCCGAGATCGCCGCCGCAACCGCCAATTTCTCTTCCCCGCGCCTCTCTTCTTCCTCCTGGCGCTGCGTAATTCGCCAACGCGACGTCGTCGTTTCGCGCCGCAACTTCCGCCAACAAATTGATCTTCCGGAGCTCAGTCGCCGCCTCGCGCTCATCTGCCGGAGCCACCACAGCAGCCTCGTGAAACTCCTCGGCGCGTCGGTCTCCGGCGCCGTCATCTTCCTCGTCTACGAGTTCGTCCCCGGCGCCAGCCTCGCCGACTGCCTCCGCAACCGCCGGAACCCTAGCTTCACCGATCTCAAGACGTGGATCTCTCGGATGCAGATCGCGTCCGACGTGGCGCACGGTCTCGATTACATCCACAATTTCTCCGGCTCCGGTTCGGATTCCGGAGCCGGATTCGTTCACAATCATATCAAGATTTCGAGCATTGTAATCACGGAGGAGAATCTGCGCGCGAAAATCTGCCACTTCGGCGCGTCAGACCTCTGCGGCGAGGCCGTCGCCGGCGAAGGCGAGCCTTCCGGCGGCCGGATGGTGAGGATCGAGGGGAGAAGGGGCTACATGGCGCCGGAGTTTCAGATCAGCGGCCTCGCGACGAAGAAGACCGACGTGTACGCCTTCGGAGTCGTTGTTTTGGAGCTGCTGAGCGGGGAAGAGGCGTTGAAGTTCGAATTCAACGACGACGGAGGTTATCGGAGGATTAGCGTGGTGGAGACGGCGAAGATTGCGGCGGAGGTGAACGGCGGCGTGAGGAAGTGGGCGGATAAGAGGCTGAGGGATTCGTTTCCCGTGAAAGTTGCGGAGAGAATGCTTCGGGTCGGGTTGGAGTGTGTTTGCGATGACCCGAATAAGAGACCCGACATGGGTCGGGTCTCGAATGAGGTGTCGAAGCTGTATTTGGAATCGAAGGAGTGGGATGAAAAAATGGGAACCGATATTGACTTGTCGGTGTCGTTGGCCCCACGGTGA 1269 0.5682 MCKSKKSTSVIQPRTRTNTKTTNSPRPHRTRTPTSSSSNYETSTSDVPITESRSYVFENNNNSNTNYDFEWSKTSSISSRASLSSLRDTLPENPNIYHFSEIAAATANFSSPRLSSSSWRCVIRQRDVVVSRRNFRQQIDLPELSRRLALICRSHHSSLVKLLGASVSGAVIFLVYEFVPGASLADCLRNRRNPSFTDLKTWISRMQIASDVAHGLDYIHNFSGSGSDSGAGFVHNHIKISSIVITEENLRAKICHFGASDLCGEAVAGEGEPSGGRMVRIEGRRGYMAPEFQISGLATKKTDVYAFGVVVLELLSGEEALKFEFNDDGGYRRISVVETAKIAAEVNGGVRKWADKRLRDSFPVKVAERMLRVGLECVCDDPNKRPDMGRVSNEVSKLYLESKEWDEKMGTDIDLSVSLAPR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01698 422 SUPERFAMILY Protein kinase-like (PK-like) 126 392 IPR011009 -
Gma20g01698 422 Gene3D Phosphorylase Kinase; domain 1 70 178 - -
Gma20g01698 422 Pfam Protein kinase domain 145 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01698 422 MobiDBLite consensus disorder prediction 1 47 - -
Gma20g01698 422 Gene3D Transferase(Phosphotransferase) domain 1 180 417 - -
Gma20g01698 422 ProSiteProfiles Protein kinase domain profile. 108 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01698 422 PANTHER OS09G0572100 PROTEIN 1 422 - -
Gma20g01698 422 PANTHER OS09G0572100 PROTEIN 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01698 Gma-Chr20 44183643 44185471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01698 92 410 Receptor kinase-like Gene Family AT1G51940 32.530 4.38e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma20g01698 Pkinase 4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01698 - - gmx:100820374 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01698 20 44183643 44185471 Gma20g01698 20 44183643 44185471 ECH
Gma10g02010 10 47551928 47556539 Gma20g01698 20 44183643 44185471 GST