Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01685 ATGCGGTCAATTCCTTTGGGAACCTCAGTATCTCCAACTCCTATAAACACCTCAAAGTTATCACCTTTCAGTGTTAATTTTAAGAAGCCAACCACCTTTCCATCTCGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAGGATTATGCAGAGCGAGTCAAGTTGTTGATTTGTTCCCAACTGTGTCTCCTGAAATTATTGTGCGGGAGGCCAGGTTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCTTTAGATTTTGTGCTGAGGATGGACAGATTGGTGGCCATGATGGCAGGATTCACTCTACCAAACGGTTACAAGAGAATCTGTTTGGTTGCTGTTATTGGCAACTCATTTGGTGAAACTTTATTATTTGGAAGTGAAGATTTCAAGGTTGGTGGTTTTGATGGGAAAATCAGCCTCAACAAGGGATATGTGGCTGGTATATTAACAGTGGATACTGTTGCAGACTTTCTGCCTAGGAAGGGACCATTGCGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGAGAAAAATTTAGGCGGAAGGGAATAGCTAAACACTTGGTTGCAAAGGCAGAATCACAAGCCAGAAGTTGGGGGTGTCGTGCTATTGCATTGCACTGTGATTTGAAAAACCCTGCAGCCACAAAGTTATACCAAGGCCAAGGTTTCAGGTGTATCAAGGTTCCAGAGGGAGCTAACTggccacaaccaaagacctcaccggatatgaagtttaacttcatgatgaaacttctcaacagctcaactgttTCTAAATGA 837 0.405 MRSIPLGTSVSPTPINTSKLSPFSVNFKKPTTFPSRGSTPPHEFSLSQSGLCRASQVVDLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMMAGFTLPNGYKRICLVAVIGNSFGETLLFGSEDFKVGGFDGKISLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKHLVAKAESQARSWGCRAIALHCDLKNPAATKLYQGQGFRCIKVPEGANWPQPKTSPDMKFNFMMKLLNSSTVSK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01685 278 Pfam Acetyltransferase (GNAT) family 159 242 IPR000182 GO:0016407
Gma20g01685 278 Gene3D - 66 246 - -
Gma20g01685 278 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 275 - -
Gma20g01685 278 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 68 253 IPR016181 -
Gma20g01685 278 CDD NAT_SF 184 225 - -
Gma20g01685 278 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 68 272 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01685 Gma-Chr20 44024674 44027549 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gma20g01685 Acetyltransf_1 2.6e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01685 - - gmx:100816118 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01685 20 44024674 44027549 Gma20g01685 20 44024674 44027549 ECH
Gma10g02023 10 47709570 47712826 Gma20g01685 20 44024674 44027549 GST
Gma16g01420 16 33188037 33190302 Gma20g01685 20 44024674 44027549 PCT
Gma02g00673 02 6501341 6504641 Gma20g01685 20 44024674 44027549 PCT
Gma20g01685 20 44024674 44027549 Gma16g01420 16 33188037 33190302 PCT
Gma20g01685 20 44024674 44027549 Gma02g00673 02 6501341 6504641 PCT