Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01673 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCCGAGTCGCTTGGGTCTGTCGCCAGATGGAGGGATTCCTCGCACCACCGCGACTTCAACCGCTGGGGATCCGCCGAGTTTCGCCGACCGCCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTTCCGAGGAATCTGGTCATGGGTATGCGATTTCTCGGTCCAGCAGCGACAAGATGCTGGAAGATGATAGTCGGCCGTCGTTCTCGCGGGGTGATGGGAAGTATGGCAGGAGCAGTAGGGAAAATAGAGGAGGGCCCTTTGGTCAGAGAGATTGGCGAGGGCATTCATGGGAGCCCAGCAATGGTTCTATTAGTTTTCCCAGGAGGCAGCAGGATGTGAACAATGACCATAGGTCAATAGATGATGCCCTAGCGTATTCCCCTCATCCACATTCTGATTTCGGGAACGCTTGGGATCAGCACCACTTGAAAGACCAGCATGATAAGATGGGTGGTGTCAATGATTTCGGAGCTGGCCCAAGATGTGATAGAGAGAACTCTCTGGGTGACTGGAAGCCACTTAAATGGACCCGCTCTGGAAGTTTGTCATCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGGAGCAGATTCCCATGAAGCGAAGGCCGAGTTGCTACCCAAAAGTGTGGCTGTTAATGAGTCGCATTCAGGGGAAGCTGCTGCTTGTGCCACATCTTCTGTGCCATCTGAGGATACAACTTCTAGAAAAAAGCCTAGGCTGGGTTGGGGGGAGGGACTTGCAAAGTATGAGAAGAAGAAAGTCGAGGTGCCTGAAGCAAGTGCAAACAAAGATGGTCCTGTCTTGTCTACTAGCAACACAGAACCTTGTAATCTCCTCAGTCCCAGCTTAGTTGATAAAAGCCCAAAAGTTATAGGATTCTCAGAATGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCTGGTATGGATGATAAATTATTTGGGAAGACCGCAAATGTGGACAATGATGTTAGTAATTTGACTGGTTCACCTGCTCCTGTGTCTGAAAATCATTTTGCGAGGTTTTCTTTTAACTTAGAGAAATTTGATATCGACTCCTTGAATAATTTGGGTTCTTCAATTATTGAGTTGGTACAATCTGATGATCCAACTTCTCTGGATTCTGGTCCAATGAGGTCCAATGCAATTAACAAGTTACTGATATGGAAAGCTGACATTTCAAAGGTGTTGGAGATGACTGAATCTGAAATAGATTTACTTGAAAATGAACTGAAGTCACTAAAATCTGAATCTGGGGAAACATGCCCTTGTTCATGTCCAGTAGCCTTGGGCTCCCAGATGGTAGGTGGTGATGAAAAATACGGTGAAGAACATGTTGGAGTCTCTGATCAGGTCATCCGGCCATTACCGCTGAAAGTTGTTGATGATCCCAATACGGAGAAGATGCCCCTTTCAACTAACTTACATAGTATTCATGAAAATGGCAAGGAAGAGGACATTGATAGTCCTGGGACAGCTACTTCTAAATTTGTTGAGCCTTTGCCTTTAATTAAAGCAGTTTCTTGTGATACCAGGGGATATGATAACTTCTCCAGGGACTTGGATGCTGTTCAGTCTACAGCTGTGAAATGCCTAGTTCCCTGTACTACTAGGAAAGAAGCTAGTGTGTCTACTTTTGTTGATGGCAATACTTCTATGGCGCTAAAGGATAGCATGGATATTTTATATAAAACAATTATTTCTTCCAATAAAGAATCCGCCAACAGAGCTAGTGAGGTATTTGATAAGTTATTGCCCAAAGATTGTTGCAAGATTGAGAAGATGGAGGCAAGCAGTGACACATGCACTCATACCTTCATCATGGAAAAATTTGCTGAGAAAAAGCGGTTTGCAAGATTTAAGGAGAGAGTTATTGCACTTAAGTTCAGAGCCTTGCATCACCTATGGAAAGAAGATATGCGCTTACTGTCTATCAGGAAATGCCGACCAAAATCTCACAAAAAAAATGAACTAAGTGTGCGATCTACCTGTAATGGTATCCAGAAGAATCGATTGTCCATTCGATCACGTTTTCCCTTTCCTGcaggaaatcaactaagcttggttccaacatcagagataattaattttacaagcaaactgctttcagaatcccaagttaaagtgcagagtaacaccctgaaaatgccggcattaattttggatgaaaaagagaagatgatttccaagtttgtatccagtaatgggctggttgaagatcccttggctattgagaaagaaagggctatgatcaatccttggaccccagaagagagagaagttttcttggagaaatttgctgcctttggaaaagattttcggaaaattgcttcttttcttgaccacaagacagcggctgactgtgttgaattctactacaaaaatcataaatctgattgttttgagaaaattaagaagcaagatggttgtaagcttgggaagtcatattcagcaaaaactgacttgattgcatcaggtaaaaaatggaaccgtgaattgagtgcttcttcgcttgatattttgagtgcagcatcattgatggcagatggcattgcaggtaacaaaaaattgcgtacaggaagctcacttttgggtggatatggtaaagtgaAGACATCAAGGGGTGAGGACTTCATAGAGAAATCAAGTAGTTTTGACATTCTTGGGgatgaaagagaaactgctgctgcagctgatgtattggctggtatatgtggttctctttcatccgaggctaTGAGTTCCTGCATAACAAGTTCAGTTGATCCTGTAGAAGGTAACAGGGATAGGAAGTTCCTGAAAGTAAACCCTTTATGCAAACCACCCATGACACCTGATGTtactcaagatgttgatgatgagacttgctcagatgagagctgtggtgaaatggatcctacagattggactgatgatgagaagactgcttttcttcaggctgtatcatcctttgggaaggattttgccaagatagcacggtgtgttgggacaaggtcccaagaacagtgcaaagttttctttagcaagggccggaaatgccttggattagatctcatgcgcccaatacctgagaatgttggatccccggttaatgatgatgcaaatgggggtgagagtgacacagatgatgcatgtgttgttgagacaggctcggtggttggaactgataagtcaggcactaaaacagatgaggacctgcctttgtatggcacaaacacataccatgatgaatcccatcctgtggaagctaggaacctgtcagctgaattaaatgaatcaaaggaaattattgggacagaagtagatcttgaagatgcaaatgtcacttctggtgcttatcaaatcaatattgattctgaacagggctgtgatggtagtgaagttttcttgtgtgtttctaacaagtctggatctgttggtgaacaagcaggtataattatgtcagatagcacagaagttggaaaagataaagcaaataaattgggaggtgcagctacagaattaatttctgctccagattcaagtgaaccatgcgagagtaattctgttgctgaggatagaATGGTTGTTTCCGAGGTTTCTTCTGGTGGTCTTGGAAATGAATTGGAGAGGTATAGAGTGTCTGCTACCCTATGTGttgatgatagagataataaatatgaagctgattcaggtgttatagttgatttgaaaagctctgtgcatgatttaagcactatggtaaattcttcactctcatctttggGCACTTCTTGTTCAGGATTGAGTTTTTGTTCTGAAAATAAGCATGTGCCCCTTGGAAAGCCTCATGTCTCTGCATTGTCTATGGACGATCTTCTTGCAACTTCAAACTCATTGTTGCAAAACACAGTTGCTGTTGATGTTCAATGTGAGAAAACAGCTAGCCAAGATCAAATGTCCTCTACTTGTGATATTCAGGGAGGTAGAGATATGCACTGTCAGAATTCCATTAGCAATGCTGGCCATCAGCTCCCTATTACTGGGAATTTATCAGACCATGTTGATGCTGTTAGCATTCTCCAGGGATATCCCTTTCAAGTTCCTTTGaagaaagaaatgaatggcgatatgaattgcagcagttcagcaactgaattgccttttctgccccataagattgaacaggatgatgatcatatcaaaacattccagtcgtcagattcagataaaacatccagaaatggtgatgtgaaactgtttgggaagatactaaccaatccttcaaccacacagaaacCTAATGTGGGTGCTAAAGGGAGTGAAGAAAATGGCACCCATCATCCTAAGTTAAGCAGCAAGTCTTCTAATCTGAAATTTACTGGCCATCATAGTGCTGATGGAAATTTGAAAATTTTGAAGTTTGACCATAATGATTATGTTGGCcttgaaaatgttcttgaaaatgttcCCATGAGGAGTTATGGTTATTGGGATGGGAACCGAATACAGACTGGTCTCTCGACATTGCCTGATTCTGCCATCTTGCTAGCAAAGTATCCTGCTGCCTTCAGTAATTATCCCACATCTTCTGCCAAATTGGAGCAACCATCATTGCAGACATATTCCAAGAATAATGAACGGCTCCTGAATGGTGCACCCACTTTGACGACAACTAGAGACATCAATGGCAGCAATGCTGTGATTGATTATCAGGTGTTTAGAAGGGATGGTCCAAAAGTGCAACCATTTATGGTAGATGTCAAGCACTGCCAAGATGTATTCTCTGAGATGCAGAGAAGAAATGGATTCGAAGCAATCTCAAGTTTACAGCAGCAGAGCAGGGGAGTGATGGGAATGAATGGTGTTGGAAGACCGGGGATTCTTGTGGGAGGATCGTGCAGTGGGGTCTCAGATCCTGTGGCTGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGCGGTCAGACTGGGAGTATTGCAAGAGAGGATGAATCATGGGGAGGGAAAGGGGATTGA 5076 0.2987 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEESGHGYAISRSSSDKMLEDDSRPSFSRGDGKYGRSSRENRGGPFGQRDWRGHSWEPSNGSISFPRRQQDVNNDHRSIDDALAYSPHPHSDFGNAWDQHHLKDQHDKMGGVNDFGAGPRCDRENSLGDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGGADSHEAKAELLPKSVAVNESHSGEAAACATSSVPSEDTTSRKKPRLGWGEGLAKYEKKKVEVPEASANKDGPVLSTSNTEPCNLLSPSLVDKSPKVIGFSECASPATPSSVACSSSPGMDDKLFGKTANVDNDVSNLTGSPAPVSENHFARFSFNLEKFDIDSLNNLGSSIIELVQSDDPTSLDSGPMRSNAINKLLIWKADISKVLEMTESEIDLLENELKSLKSESGETCPCSCPVALGSQMVGGDEKYGEEHVGVSDQVIRPLPLKVVDDPNTEKMPLSTNLHSIHENGKEEDIDSPGTATSKFVEPLPLIKAVSCDTRGYDNFSRDLDAVQSTAVKCLVPCTTRKEASVSTFVDGNTSMALKDSMDILYKTIISSNKESANRASEVFDKLLPKDCCKIEKMEASSDTCTHTFIMEKFAEKKRFARFKERVIALKFRALHHLWKEDMRLLSIRKCRPKSHKKNELSVRSTCNGIQKNRLSIRSRFPFPAGNQLSLVPTSEIINFTSKLLSESQVKVQSNTLKMPALILDEKEKMISKFVSSNGLVEDPLAIEKERAMINPWTPEEREVFLEKFAAFGKDFRKIASFLDHKTAADCVEFYYKNHKSDCFEKIKKQDGCKLGKSYSAKTDLIASGKKWNRELSASSLDILSAASLMADGIAGNKKLRTGSSLLGGYGKVKTSRGEDFIEKSSSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSVDPVEGNRDRKFLKVNPLCKPPMTPDVTQDVDDETCSDESCGEMDPTDWTDDEKTAFLQAVSSFGKDFAKIARCVGTRSQEQCKVFFSKGRKCLGLDLMRPIPENVGSPVNDDANGGESDTDDACVVETGSVVGTDKSGTKTDEDLPLYGTNTYHDESHPVEARNLSAELNESKEIIGTEVDLEDANVTSGAYQINIDSEQGCDGSEVFLCVSNKSGSVGEQAGIIMSDSTEVGKDKANKLGGAATELISAPDSSEPCESNSVAEDRMVVSEVSSGGLGNELERYRVSATLCVDDRDNKYEADSGVIVDLKSSVHDLSTMVNSSLSSLGTSCSGLSFCSENKHVPLGKPHVSALSMDDLLATSNSLLQNTVAVDVQCEKTASQDQMSSTCDIQGGRDMHCQNSISNAGHQLPITGNLSDHVDAVSILQGYPFQVPLKKEMNGDMNCSSSATELPFLPHKIEQDDDHIKTFQSSDSDKTSRNGDVKLFGKILTNPSTTQKPNVGAKGSEENGTHHPKLSSKSSNLKFTGHHSADGNLKILKFDHNDYVGLENVLENVPMRSYGYWDGNRIQTGLSTLPDSAILLAKYPAAFSNYPTSSAKLEQPSLQTYSKNNERLLNGAPTLTTTRDINGSNAVIDYQVFRRDGPKVQPFMVDVKHCQDVFSEMQRRNGFEAISSLQQQSRGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKYGGQTGSIAREDESWGGKGD 1691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01673 1691 MobiDBLite consensus disorder prediction 1088 1108 - -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 78 110 - -
Gma20g01673 1691 Pfam Myb-like DNA-binding domain 785 826 IPR001005 -
Gma20g01673 1691 Pfam Myb-like DNA-binding domain 1000 1039 IPR001005 -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 976 1001 - -
Gma20g01673 1691 SUPERFAMILY Homeodomain-like 769 829 IPR009057 -
Gma20g01673 1691 Coils Coil 422 449 - -
Gma20g01673 1691 Gene3D - 974 1052 - -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 1442 1457 - -
Gma20g01673 1691 CDD SANT 785 827 IPR001005 -
Gma20g01673 1691 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1667 - -
Gma20g01673 1691 ProSiteProfiles SANT domain profile. 781 832 IPR017884 -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 1672 1691 - -
Gma20g01673 1691 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1667 - -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 1439 1478 - -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 17 269 - -
Gma20g01673 1691 ProSiteProfiles SANT domain profile. 999 1039 IPR017884 -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 983 998 - -
Gma20g01673 1691 CDD SANT 1001 1039 IPR001005 -
Gma20g01673 1691 SUPERFAMILY Homeodomain-like 998 1047 IPR009057 -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 199 222 - -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 118 132 - -
Gma20g01673 1691 Gene3D - 762 834 - -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 157 173 - -
Gma20g01673 1691 MobiDBLite consensus disorder prediction 17 45 - -
Gma20g01673 1691 SMART sant 782 830 IPR001005 -
Gma20g01673 1691 SMART sant 997 1045 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01673 Gma-Chr20 43842935 43851793 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma20g01673 Myb_DNA-binding 7.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01673 - - gmx:100810588 3338.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01673 20 43842935 43851793 Gma20g01673 20 43842935 43851793 ECH
Gma10g02039 10 47918054 47926465 Gma20g01673 20 43842935 43851793 GST