Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01667 ATGAGGTTTATAGGTCAAATTCATTCATCGTTGAAGttttctcctttcctccttttttgtcctttcttcctCTTCACAGGATTAAAGGAACTCCAAATGGGGAGGAAAGGGGGTTGGTTTTCTGCAGTGAAGAGAGTTTTTGTTTCTGATTCCAAAAAGGAACAGAAACACCATCATCATCATCATCATCATAAGTCAAAGTTAGGATGTTTTGGGACTCATCACTATGAGGATCTAGAAGGAGCACCAATTGCCGTTGTTCCTTCACTTCCACCAAGAAAAGATCCCAAACCAATAAGTGAGGCAGAGAATAATGAACAGAGCAGGCAAGCCTTTTCTTTGGTTTTGGCTACTGCTGTGGCCGCCGGGGCTGCTGTTGCTGCAGAGGTTGCTTGTCTCACAAACACGCCTCGTTCCAATGGAAAAGCGAATCAAGAAATGGCAGCTATCAAGATTCAAACAGCTTACCGTGGATATTTGGCAAGAAGATCCTTGCGTGGCTTGAGAGGTTTGTCGAGGTTGAAAACATTGGTGCAAGGGCAATCTGTTCAACGGCAAGCAGCTACTACCTTGCAATGCATGCAAACTCTTTCACGGTTGCAGTCTCAGGTTCGTGCAAGGAAGGTCAGAATGTCTGAGGAGAATCAGGCTCTTCATAGGCAACTGCAGCAGAAACGTGAAAAGGAATTTGACAAGTCGCAAGCTAATCAGATTGGAGAGAAGTGGGATGATAGCTTGAAATCAAAGGAGCAAGTTGAAGCCAAATTGTTGAACAGACAAGTAGCAGCTATGAGAAGAGAAAAGGCTTTGGTCTATGCATCAACACATCAGCAAACGTGGAGGAACTCTTCAAAATCTGCTACAAATGCAGCATTTATGGATCCAAACAATCCCCACTGGGGCTGGAATTGGCTAGAGCGATGGATGGCTGCAAGGCCATGGGAGGGTCAAAACACTACATACCACATTGGCCATGCATCTGCCAAAAGTGTTGCAAGCCAAACCATGTCAGTTGGTGAAATCACAAAATTGTATTCTCTCCGTGATCAGAATAATGATATCAAAATTTCCCCAGCAAGCCAAAAACCAACCTGCCCTCCCAGCCACAATTCTCCTTCAACAACAGCCTCAAAGGTCCCATTAGCCAATGGAGCAAAGGCAAAGGTACTATCAAGTCCAAGGGGTGGTTCATGGGGTAGTGATGGTGACTCAAAAAACATGTTCAGCAAAACCTCAGAAAACAGCCGCAGGCACAGCATTGGAGTGTCTCAAGTGAGAGATGATGAGAGCAATTCAAGCTCATCACCGTCCACAAAGGTTGCAACAAAGGCAAAGTCATCATCATCCAAAGTGAGAAGTGCATTGGTTGGCGAACATAGTAATGGAACACCTGAAAAAGCAGCTTCTGCTCTCATAAAGAAGAGGCTTTCTTTCCCTGCTTCTCCAGCCGGTACAAGAAGGTATGCTGTTTCAACTAGACCGGGAAATGTGGCTTCCAACAAGAGTGTTGCTAATGCTACCATCCCTGAGGAGAAAGTGAGAATGAGAAATGGAGGGAGCAGGTAG 1566 0.4425 MRFIGQIHSSLKFSPFLLFCPFFLFTGLKELQMGRKGGWFSAVKRVFVSDSKKEQKHHHHHHHHKSKLGCFGTHHYEDLEGAPIAVVPSLPPRKDPKPISEAENNEQSRQAFSLVLATAVAAGAAVAAEVACLTNTPRSNGKANQEMAAIKIQTAYRGYLARRSLRGLRGLSRLKTLVQGQSVQRQAATTLQCMQTLSRLQSQVRARKVRMSEENQALHRQLQQKREKEFDKSQANQIGEKWDDSLKSKEQVEAKLLNRQVAAMRREKALVYASTHQQTWRNSSKSATNAAFMDPNNPHWGWNWLERWMAARPWEGQNTTYHIGHASAKSVASQTMSVGEITKLYSLRDQNNDIKISPASQKPTCPPSHNSPSTTASKVPLANGAKAKVLSSPRGGSWGSDGDSKNMFSKTSENSRRHSIGVSQVRDDESNSSSSPSTKVATKAKSSSSKVRSALVGEHSNGTPEKAASALIKKRLSFPASPAGTRRYAVSTRPGNVASNKSVANATIPEEKVRMRNGGSR 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01667 521 MobiDBLite consensus disorder prediction 354 502 - -
Gma20g01667 521 SMART iq_5 144 166 IPR000048 GO:0005515
Gma20g01667 521 Coils Coil 208 228 - -
Gma20g01667 521 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 33 513 - -
Gma20g01667 521 Coils Coil 247 267 - -
Gma20g01667 521 ProSiteProfiles IQ motif profile. 145 173 IPR000048 GO:0005515
Gma20g01667 521 PANTHER IQ-DOMAIN 5-RELATED 33 513 - -
Gma20g01667 521 Pfam IQ calmodulin-binding motif 147 166 IPR000048 GO:0005515
Gma20g01667 521 MobiDBLite consensus disorder prediction 397 456 - -
Gma20g01667 521 Gene3D iswi atpase 142 169 - -
Gma20g01667 521 MobiDBLite consensus disorder prediction 354 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01667 Gma-Chr20 43797085 43800825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01667 33 483 IQD Protein Family AT5G03040 41.015 6.21e-90 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01667 - - gmx:100807725 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01667 20 43797085 43800825 Gma20g01667 20 43797085 43800825 ECH
Gma10g02044 10 47959542 47961903 Gma20g01667 20 43797085 43800825 GST