Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01658 ATGTCTGGCAATTCGAATTGCAGTGTTTACATAGGCAATCTGGATGAGAGGGTGACAGACAGGGTCTTGTATGATATATTAATTCAAGCAGGACGAGTGGTAGACTTGCACATTCCTAAAGATAAGGAATCAGAGAAACCAAAAGGTTTTGCCTTTGCAGAATATGAAACTGAAGAGATTGCAGACTATGCTGTCCGGCTTTTTTCAGGCCTCATAACACTGTACAACAGAACACTTAAGTTTGcgATATCTGGGAGAGACAAAACTACCTCTAATGGTTCTACAGCAATTGCCCCCACATTAAATTCTTCTCAAAGACCAAGGCCATATCCTGTGCCTATAAACAATTCAGAAAATTTTCAGCACCCTGCTAGGCTATCAACTCCTGATCGATTTTCAGATTATCCAGTAAATAATTCTCAAGGTATACCTATGCACGTCGCTCTCCAGATGGGTTGCTGCTTACAAACTTAA 474 0.403 MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEIADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAIAPTLNSSQRPRPYPVPINNSENFQHPARLSTPDRFSDYPVNNSQGIPMHVALQMGCCLQT 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01658 157 Gene3D - 2 97 IPR012677 -
Gma20g01658 157 MobiDBLite consensus disorder prediction 88 109 - -
Gma20g01658 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Gma20g01658 157 SMART rrm1_1 8 82 IPR000504 GO:0003723
Gma20g01658 157 SUPERFAMILY RNA-binding domain, RBD 4 81 IPR035979 GO:0003676
Gma20g01658 157 PANTHER OS01G0876500 PROTEIN 1 144 - -
Gma20g01658 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 80 IPR000504 GO:0003723
Gma20g01658 157 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01658 Gma-Chr20 43676881 43679649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01658 7 87 Eukaryotic Initiation Factors Gene Family AT1G49760 30.864 4.06e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01658 K12831 - gmx:100803118 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02057 10 48104033 48106292 Gma20g01658 20 43676881 43679649 GST