Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01651 ATGGGTGGTTCCGTTTTCACTCACTTCCTCGTTCTCCCTTCCTCTTCTTCTCTCTCTTTTCCCACTCTCTTCCCATCCAAATTCCCCACCAAACCCATCAATGAATCCGTTCCCTTCACGCTTATCTGCAACCAATTCCCTTTCAAACTCACTACTTCGCGGCCTTCCCAATTCTCAGCTCCTCCTCGTTACTCATGCTCTGTAAAAAAGATAAAAGCTTCCGGAAGTCAGCAAACAGGATCCATACGACATGGAGACAACCTTGATGCAACGAAGAGCAGGAGTTTGCTGGAGAAGTTTCAGAGGAAAATGCCAATGGAATTCCTTAGCACCCTTTTCAACAAACAATCTATGTTGAGTGACTTTACAACCAAAGATATTGTAGATGGGGAAAGATCATCCAAATGGGTTTCAGCATTCCTCTTTGGACAAACTATATCAGTGATTTCTCCTGATGTTTCATATGCAAGCAGCTCAGCAAGAATAAATGAGATATATGAGGTTGGAGAGTTGTTTGATTTAAGCATCCAACTAATATACTTGGTATTGCTATTAGGTTTGCTAGGGACTGGAACTTTCTTTGTGATTCGTCAAGTTCTTGTCCGCAGAGAACTTGACCTATCTGCCAAAGAGTTGCAGGAGCAAGTAAGAAGTGGTGATGCTGGTGCAACTGAGCTTTTTGAACTTGGTGCAGTGATGCTGCGCAGGAAATTTTACCCTGCTGCTACCAAGTTCTTGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAGGTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAAGGAATTGCTCAGTTTGAGACAGCTGTCAAGCTTCAACCAGGCTATGTCACAGCTTGGAACAATCTCGGTGATGCCTTTGAGAGTAAAAAGGACTACAAGTCTGCTCTAAAGGCATTTGAAGAAGTCCTACTATTTGATCCTAACAACAAGGTTGCCCGGCCTAGGAGAGATTCTTTGAAGGGACTTGTTGATGCAACCAAAGGAGTTACTGTCATCAAGTCAACAGAGAAGAAGTGA 1074 0.4376 MGGSVFTHFLVLPSSSSLSFPTLFPSKFPTKPINESVPFTLICNQFPFKLTTSRPSQFSAPPRYSCSVKKIKASGSQQTGSIRHGDNLDATKSRSLLEKFQRKMPMEFLSTLFNKQSMLSDFTTKDIVDGERSSKWVSAFLFGQTISVISPDVSYASSSARINEIYEVGELFDLSIQLIYLVLLLGLLGTGTFFVIRQVLVRRELDLSAKELQEQVRSGDAGATELFELGAVMLRRKFYPAATKFLLQAIEKWDGDNPDLAQVYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAFESKKDYKSALKAFEEVLLFDPNNKVARPRRDSLKGLVDATKGVTVIKSTEKK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01651 357 SUPERFAMILY TPR-like 223 332 IPR011990 GO:0005515
Gma20g01651 357 ProSiteProfiles TPR repeat profile. 261 294 IPR019734 GO:0005515
Gma20g01651 357 Gene3D Tetratricopeptide repeat domain 217 339 IPR011990 GO:0005515
Gma20g01651 357 ProSiteProfiles TPR repeat profile. 295 328 IPR019734 GO:0005515
Gma20g01651 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 61 347 - -
Gma20g01651 357 PANTHER TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN PYG7, CHLOROPLASTIC 61 347 - -
Gma20g01651 357 SMART tpr_5 295 328 IPR019734 GO:0005515
Gma20g01651 357 SMART tpr_5 261 294 IPR019734 GO:0005515
Gma20g01651 357 ProSiteProfiles TPR repeat region circular profile. 295 328 - -
Gma20g01651 357 Pfam Tetratricopeptide repeat 266 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01651 Gma-Chr20 43618681 43622412 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01651 20 43618681 43622412 Gma20g01651 20 43618681 43622412 ECH
Gma10g02062 10 48143622 48152098 Gma20g01651 20 43618681 43622412 GST