Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01644 ATGACATTAGCCCCAATTCCTGAGAGATCATCATCAATTGATATGGAATCATGTGTGCCTCCTGGATTTAGATTTCATCCCACAGAAGAGGAGCTTGTGGGGTATTACCTCAAGAGGAAGATAAACTCGCTAAAAATCGATCTAGATGTTATTGTTGAGATTGATCTCTACAAAATGGAACCTTGGGACATACAAGATAGGTGCAAGCTAGGATATGAGCAGCAGAATGAGTGGTACTTTTTCAGCCATAAAGATAAGAAGTATCCAACAGGGACAAGAACTAACAGGGCCACTGCTGctggattctggaaggcaacgggaagagacaaggctgtgatgtccAAAAATAGAATCATAGGAATGAGGAAGACCTTGGTTTTCTACAAGGGACGTGCCCCTAATGGAAGGAAAACAGACTGGATTATGCATGAATATAGGCATCAAACCTCTGAAcatggccctccccaggcaaAAGGATGGGTTGTGTGCCGAGCATTTCGAAAACCTAGTCCAAGTCACAGGCAAGGTTTTGACCCATGGTGCAGCACTAGTAGTCAACAACAACACTTTTTCAGAGATCAAATTCAAAGCTATGCAAGACCCTTATCAATTGCCGACATTTTGAATGAAACAAATAATGTGCCTCACCCTGTTGAAGGTACAAGTTTTAGTCACTCCTTCAACTCGGATAATCAGCAACACTTGAATAATATTATATCAAACCAAACTGCTATCATTATGGACAAACAACTCCTTGAGCTTCCACAGCTAGATAGTCCCACTGCAAGTTTGGCAATCAAAGAATGTAACCAACAACAACACAATGGCCTAACAAATGAGGAGTATTGCAGTGATGAAAGAAGCAATAGCAGTGCACAAGGCATCGATTGGAAGAGCTTCGACAACTTGTTTGGGTCACAATTGAGTGATAATGCAGCTTATTTTTCACATCCAAACTTGCCCTTGGTGATGCCCCATAACCATGATCAAGCTAGTCATATCCTAGGATGCTTCCCTGATTCATAA 1026 0.384 MTLAPIPERSSSIDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQAKGWVVCRAFRKPSPSHRQGFDPWCSTSSQQQHFFRDQIQSYARPLSIADILNETNNVPHPVEGTSFSHSFNSDNQQHLNNIISNQTAIIMDKQLLELPQLDSPTASLAIKECNQQQHNGLTNEEYCSDERSNSSAQGIDWKSFDNLFGSQLSDNAAYFSHPNLPLVMPHNHDQASHILGCFPDS 341
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01644 341 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Gma20g01644 341 ProSiteProfiles NAC domain profile. 19 168 IPR003441 GO:0003677|GO:0006355
Gma20g01644 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 322 - -
Gma20g01644 341 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Gma20g01644 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 17 322 - -
Gma20g01644 341 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma20g01644 Gma-Chr20 43530349 43535037 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01644 15 341 NAC Transcription Factor Family AT1G71930 53.333 3.90e-117 340
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma20g01644 NAM 8.4e-37 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01644 - - gmx:100812904 708.753
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02070 10 48229012 48233953 Gma20g01644 20 43530349 43535037 GST