Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01639 ATGGGAATTTCTTCACAGCCTTCTCTTGTTTCCTTCTCTTTGAAAGATCTGATTCAGGGAACTGAAGAAAACAAAACTTCTTCATCATATGGGTGTTTGTGGAGCAAAGTCTTGACAGCACAAGCCAAGAAGGTGAAAGGCACAAAGAGAAGTGTTAGGAGGCCAAGGAGGATTTTGATGATGAATAGAAGGAGTGGCTCTAGAAGAGGATCCTACAATGGGATTAGAAGACGTGTGAGAACATTGAAGAGCCTTGTGCCAAATAGTGACTCTTTGGGGTTGGATGGACTCTTCAGACAAACTGCTGATTACATATTGTCTCTACAAACGAGAGTGAGAGTCATGCAGGTTATGGTTAAGGTATTGACAGGCTCTGACGAGTGA 384 0.4271 MGISSQPSLVSFSLKDLIQGTEENKTSSSYGCLWSKVLTAQAKKVKGTKRSVRRPRRILMMNRRSGSRRGSYNGIRRRVRTLKSLVPNSDSLGLDGLFRQTADYILSLQTRVRVMQVMVKVLTGSDE 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01639 127 PANTHER TRANSCRIPTION FACTOR UPBEAT1 3 124 - -
Gma20g01639 127 CDD bHLH_AtIBH1_like 63 119 IPR044549 GO:0006355
Gma20g01639 127 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 124 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01639 Gma-Chr20 43499142 43499525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01639 56 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 56.757 1.33e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01639 - - gmx:100794627 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02076 10 48274228 48274718 Gma20g01639 20 43499142 43499525 GST