Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01629 ATGGCCACCAATACAACAACAGCTTCATCCTCTGTTGTATTTTCTCCCGAGAAACTGAATTTCTGGCTGGACAACCCTTCTCCAATTTCCTTGACTTGGGATCAGGTGAAGCACTGCAGGGAAGCCCTCACCTCGTTGAAGGACAAGTTTGACCACACTCCTGAGAGTATCACCCACGAGTTCAAACTCTTAGAGGCTAACAGGGCAGTAACAGAAAGTGAGACCGATAAAATATGCGCCGTAGCTCTTGATCGTGACAATTTTAGCAAAAATCGACACGACGTTTATCCACTGGACAAGAACAGGATAATTCTGAAGTCAACACATGGTTATATCAACGCAAGCCCTATGTCGGTCCACTTGAAGAAAGCTATGGGGGGGAAATGGTTGTCCATAGCATCACTGTCTATTAACTTGATTGAGTTGGGTGAAAACTACTTTGACTTCACCGCTGGTATTGACCCATCTCCCATAgagatcagAACTGGAGCATACTGCACCATTCACAACACAATTCAGACAATACTTGCTGGTGATATGTCTGCTGTAAATATTGCTGACGCAGTGGCTACCTTCAGAACCCAGCGTCTTAGAATGGTCCAGACTCAGGCTCATAATAAGAATAGAAGGTGTTGGACCAAAGGATGTTAA 651 0.4409 MATNTTTASSSVVFSPEKLNFWLDNPSPISLTWDQVKHCREALTSLKDKFDHTPESITHEFKLLEANRAVTESETDKICAVALDRDNFSKNRHDVYPLDKNRIILKSTHGYINASPMSVHLKKAMGGKWLSIASLSINLIELGENYFDFTAGIDPSPIEIRTGAYCTIHNTIQTILAGDMSAVNIADAVATFRTQRLRMVQTQAHNKNRRCWTKGC 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01629 216 Gene3D Protein tyrosine phosphatase superfamily 29 128 IPR029021 -
Gma20g01629 216 Gene3D Protein tyrosine phosphatase superfamily 160 207 IPR029021 -
Gma20g01629 216 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 205 IPR029021 -
Gma20g01629 216 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 15 115 - -
Gma20g01629 216 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 161 203 - -
Gma20g01629 216 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 15 115 - -
Gma20g01629 216 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 161 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01629 Gma-Chr20 43373229 43376780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01629 161 202 Protein tyrosine phosphatase (PTP) family AT1G71860 71.429 1.79e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01629 - - gsj:114402669 238.81