LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma20g01609	ATGGAAGCTGCGATGGGACTGATGCGGAGGATTCCTCCGAAACACACAGAAACAGCTCTGTCAGCGCTTCTGAGCCTTATGCCTGACAACTCCTCCGATCTCCTCTCTCAAGTCGATCAGCCCCTCCAGGTTCTGTGCGATGTGGAATGCGGCAAGGAGTTCATTTTGTGCGAATACAATAGAGATGCCGACTCTTACAGATCACCTTGGTCCAATAAATACCATCCACCATTAGAAGATGGGTCCCTCCCTTCTTCAGAGTTGCGGAAGCTTGAAATTGAAGCAAATGACATATTTGCAATATATCGTGACCAgtattatgaaggtggcatttcatcagtttacatgtgggaagatgataatgaaggtttcgtagcctgctttttaataaagaaagatggctcaaagacagggcagggccgacggggatatttagaggaaggtgcatgggatgctatacatgttatagaggtgggaccagaggaagaagaaaacaccaattatcgtttaaccagtacagttatgctgactctgactacaaataatgagtcatccggaactttcagtttatctggttcaattaggcgtcagatgagtatgaagctatcagttgctgatgggcatctttgtaacatgggaaggatgattgaagaaatggagagtaagctgaggaactcactagatcaggtatactttgggaaaacaagagaaatGGTTTGCACACTGAGACCACCATCTGAAGTGGCACAGTTGAGAATGCCTGATAGCGCCTGA	774	0.2364	MEAAMGLMRRIPPKHTETALSALLSLMPDNSSDLLSQVDQPLQVLCDVECGKEFILCEYNRDADSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTTNNESSGTFSLSGSIRRQMSMKLSVADGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVCTLRPPSEVAQLRMPDSA	257

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma20g01609	257	Gene3D	-	1	84	IPR043175	-
	Gma20g01609	257	Pfam	F-actin capping protein, beta subunit	1	239	IPR001698	GO:0008290\|GO:0051016
	Gma20g01609	257	SUPERFAMILY	Subunits of heterodimeric actin filament capping protein Capz	2	245	IPR037282	-
	Gma20g01609	257	ProSitePatterns	F-actin capping protein beta subunit signature.	57	62	IPR019771	GO:0003779\|GO:0005737\|GO:0008290\|GO:0030036
	Gma20g01609	257	PANTHER	F-ACTIN-CAPPING PROTEIN SUBUNIT BETA	2	249	IPR001698	GO:0008290\|GO:0051016
	Gma20g01609	257	PRINTS	F-actin capping protein beta subunit signature	21	42	IPR001698	GO:0008290\|GO:0051016
	Gma20g01609	257	PRINTS	F-actin capping protein beta subunit signature	52	78	IPR001698	GO:0008290\|GO:0051016
	Gma20g01609	257	PRINTS	F-actin capping protein beta subunit signature	92	119	IPR001698	GO:0008290\|GO:0051016
	Gma20g01609	257	PRINTS	F-actin capping protein beta subunit signature	211	237	IPR001698	GO:0008290\|GO:0051016
	Gma20g01609	257	Gene3D	-	85	255	IPR042276	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma20g01609	Gma-Chr20	43201301	43204826	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma20g01609	K10365		-	gmx:100785640	522.702

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma10g02105	10	48555129	48562040	Gma20g01609	20	43201301	43204826	GST