Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01594 ATGAATATTGATCTAATTGCAGACGGTGCATTGCTGGAGGTTGCTCGTGACGGAGGAAAGATTGTTTTGAAGGGTCTGTACTCTGGGTTGGCTGGAAATCTTGTTGGTGTCTTACCAGCTTCGGCAATTTTTATTGGTGTGTATGAACCCGCAAAGCAGCAATTGCTAAAGTCATTGCCTGAAAATATCAGTTCTGTGGCTCATTTTGCTGCAGGTGCTATTGGAGGCGTTGCTTCTTCTGTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGGATGCAGATTGGGCAATTTAGATCAGCCCCGGATGCTGTCCGTCTTATTGTCGCTAATGAGGGTTTTAATGGCCTTTTTGCGGGATATGGATCTTTCTTATTGCGAGATTTACCATTTGATGCTATAGAATTATGCATTTATGAGCAGCTCCGTATTGGGTATAAATTAGCGGCAAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGGTGCCATTGATGGAACAGGCATCAGTGATTGTGTGAGGACAATAGTTAGAGAAGAAGGAAGTCATTCTCTTTTTAAGGGTATTGGGCCTAGAGTTTTGTGGATAGGAGTTAGAGGTTCAATATTCTTTTGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAGAGGCGGCACTCCAAAGCTGCTGATGATGATGTTGCAATGCACACTTAA 711 0.4304 MNIDLIADGALLEVARDGGKIVLKGLYSGLAGNLVGVLPASAIFIGVYEPAKQQLLKSLPENISSVAHFAAGAIGGVASSVVRVPTEVVKQRMQIGQFRSAPDAVRLIVANEGFNGLFAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDPNDPENAMLGAVAGAIDGTGISDCVRTIVREEGSHSLFKGIGPRVLWIGVRGSIFFCVLEKTKQILAQRRHSKAADDDVAMHT 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01594 236 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 11 171 - -
Gma20g01594 236 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 172 227 - -
Gma20g01594 236 Pfam Mitochondrial carrier protein 171 221 IPR018108 -
Gma20g01594 236 Pfam Mitochondrial carrier protein 63 143 IPR018108 -
Gma20g01594 236 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 172 227 - -
Gma20g01594 236 Gene3D Mitochondrial carrier domain 8 235 IPR023395 -
Gma20g01594 236 SUPERFAMILY Mitochondrial carrier 12 213 IPR023395 -
Gma20g01594 236 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 11 171 - -
Gma20g01594 236 ProSiteProfiles Solute carrier (Solcar) repeat profile. 63 145 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01594 Gma-Chr20 43046133 43052897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01594 20 229 EF-hand Containing Proteins AT2G35800 27.234 6.92e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01594 K15111 - gmx:100800051 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01594 20 43046133 43052897 Gma20g01594 20 43046133 43052897 ECH
Gma10g02119 10 48682740 48689931 Gma20g01594 20 43046133 43052897 GST