Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01574 ATGGCGACTTCGAATTCACGAAAATCAGAAACCTCCCCTTCCCCTTCTCCCACCACCAACTTCATCCCCATCCCCGCCGCCCCCGCCCCTAAAACCGTCGATGACGTGTGGCGGGAGATCGTGGCCGGCGACCGCCGTGAGTGCAAGGAGGAGGCCCCCGACGACGACTACGACAAGGAGATGATGACCCTCGAGGACTTCCTCGCCAAGGCCGACCAAGACCAAGAACCCGACTACGACAACAACAACATCAAGATGCCAATGCCACTCACCGAGAGGCTCGGCAGCGGCACCCTCTTCTCCTTCGACCACCTTCCCACGACGCCGTTTCACGACTCCGCCGCCGCAGAAGGCTCCGTCATAGGCTTCGGAAACGGCGTCGAGGTCGTCGAAGGGGGGAGGGTTAAAAGACGGCGTCCCGTTTTGGAGCAGTTGGATAAGGCCGCGCAGCAGAGACAGAGGAGGATGATAAAAAACAGAGAATCTGCTGCTAGGTCCAGGGAACGCAAGCAGGCATACCAAGTGGAATTGGAGTCCTTGGCGGTGAAACTAGAGGAGGAAAATGACAAGCTCTTGAAGGAAAAGGCTGAGAGGAAAAAGGAGAGGTACAAGCAGctaatggaaaaagtactccctatcgcgcagaagcaaaagccaccatgtatactccgtagggctcgctccttgcaatggtag 696 0.5101 MATSNSRKSETSPSPSPTTNFIPIPAAPAPKTVDDVWREIVAGDRRECKEEAPDDDYDKEMMTLEDFLAKADQDQEPDYDNNNIKMPMPLTERLGSGTLFSFDHLPTTPFHDSAAAEGSVIGFGNGVEVVEGGRVKRRRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKERYKQLMEKVLPIAQKQKPPCILRRARSLQW 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01574 231 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 27 230 - -
Gma20g01574 231 MobiDBLite consensus disorder prediction 1 30 - -
Gma20g01574 231 PRINTS cAMP response element binding (CREB) protein signature 1 16 - -
Gma20g01574 231 PRINTS cAMP response element binding (CREB) protein signature 146 162 - -
Gma20g01574 231 PRINTS cAMP response element binding (CREB) protein signature 164 184 - -
Gma20g01574 231 PRINTS cAMP response element binding (CREB) protein signature 184 201 - -
Gma20g01574 231 CDD bZIP_plant_BZIP46 151 197 - -
Gma20g01574 231 Gene3D - 149 197 - -
Gma20g01574 231 Pfam bZIP transcription factor 149 208 IPR004827 GO:0003700|GO:0006355
Gma20g01574 231 Coils Coil 170 209 - -
Gma20g01574 231 SMART brlzneu 147 209 IPR004827 GO:0003700|GO:0006355
Gma20g01574 231 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 154 169 IPR004827 GO:0003700|GO:0006355
Gma20g01574 231 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 149 201 IPR004827 GO:0003700|GO:0006355
Gma20g01574 231 MobiDBLite consensus disorder prediction 1 17 - -
Gma20g01574 231 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 230 IPR043452 GO:0003700|GO:0045893
Gma20g01574 231 SUPERFAMILY Leucine zipper domain 151 202 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01574 Gma-Chr20 42839941 42843031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01574 31 231 bZIP Transcription Factor Family AT5G44080 52.857 1.62e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma20g01574 bZIP_1 9.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01574 K14432 - gmx:102659969 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02140 10 48884025 48887219 Gma20g01574 20 42839941 42843031 GST