Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01560 ATGGCATCAGATCACTCGTCCGTCAACCAACCCAAATTTGTCTATCCAAACAATGAACTTGAGCAACAAGAAGCCCTAGAGGTCGAAACCAAGGACTTTGACTACTCAAAGAGATCTCAATGGCTACGTGCTGCTGTTTTAGGTGCCAATGACGGGTTGGTCTCAACAGCATCACTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATCAAAGTCATGATCCTAACAGGTTTTGCAGGGCTAGTTGCTGGGGCATGCAGCATGGCCATTGGGGAGTTTGTGTCGGTTTACTCGCAGCTGGACATAGAAGTTGCTCAAATGAAAAGAGAGAAAGAAAGGGACAACATAGATCAAGAGGAAGATGGTTATGAGAAAGAGAAATTGCCAAACCCTATACATGCTGCAGCAGCATCAGCTCTTGCATTTTCAGTTGGTGCATTGGTGCCTCTCCTTGCAGCCTCTTTTATAAGGGACTATAAGGTGAGGCTTGGTGTGATTTTGGGAGCAGTGAGTTTAGCTCTTGTGGTGTTTGGTTGGTTGGGGGCAGTGTTGGGTAAGGCTCCAACATTTAGGTCTTGTGTGAGAGTCTTGCTTGGGGGGTGGCTAGCCATGGCTATTACTTTTGGGCTAACCAAGTTGATTGGGTCAAGTGGTCTTTAG 660 0.4682 MASDHSSVNQPKFVYPNNELEQQEALEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERDNIDQEEDGYEKEKLPNPIHAAAASALAFSVGALVPLLAASFIRDYKVRLGVILGAVSLALVVFGWLGAVLGKAPTFRSCVRVLLGGWLAMAITFGLTKLIGSSGL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01560 219 Pfam VIT family 120 211 IPR008217 GO:0005384|GO:0030026
Gma20g01560 219 Pfam VIT family 42 118 IPR008217 GO:0005384|GO:0030026
Gma20g01560 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 14 216 IPR008217 GO:0005384|GO:0030026
Gma20g01560 219 CDD Nodulin-21 40 188 - -
Gma20g01560 219 Coils Coil 102 122 - -
Gma20g01560 219 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 14 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01560 Gma-Chr20 42633247 42634202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01560 17 219 Nodulin-like Gene Family AT3G43660 71.921 5.11e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01560 K22736 - gmx:100814343 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02155 10 49066248 49067326 Gma20g01560 20 42633247 42634202 GST
Gma16g01500 16 34433848 34434905 Gma20g01560 20 42633247 42634202 PCT
Gma02g00743 02 7217614 7218788 Gma20g01560 20 42633247 42634202 PCT
Gma20g01560 20 42633247 42634202 Gma16g01500 16 34433848 34434905 PCT
Gma20g01560 20 42633247 42634202 Gma02g00743 02 7217614 7218788 PCT