Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01534 ATGGAAGACCCCTCAGAATCCCCACCACCCCTTAAAACCTACAAACTAACAGCCACATCAATCTCCTACACCAAATCCACCACCACCAAACCCTCATTCTCTTCACTTTTCTTCACCGCATGCACCAACACCCCACCAACCTACATCCTCAAAGACATCTCCCTGACCGCCCTCCCCTCCCAAATCCTGGCCGTGGTGGGCCCCAGCGGCGCCGGAAAATCCACCCTCCTCGACATCCTCGCCGCCCGCACCCTCCCCTCCCACGGCACCCTCCTCCTCAACTCCGCCCCTCTCGTCCCCTCCACCTTCCGCAAGCTCTCCTCCTATGTCCCCCAACACGACCACTGCCTCCCCCTCCTCACCGTCTCCGAAACCTTCCTCTTCGCCGCAAAGCTCCTCAAACCCAAAACCTcCAACCTCGCCGCCACCGTCTCCTCCCTCCTCTCCGAACTCCGACTCACGCACCTTTCCAACACTCGCCTCGCGCATGGCCTCTCCGGCGGAGAACGCAGAAGGGTCTCCATTGGCCTCAGCCTCCTCCACGATCCCGCGGTGCTACTCCTCGACGAACCCACTTCGGGGCTCGACAGCACTTCAGCCTTCAAAGTAATGCGAATTCTAAAGCAAACGTGCACCACTCGCAACAGAACCATCATTCTCTCCATTCACCAACCCAGCTTCAAGATCCTCGCTTGCATTGATAGGATCTTGCTGCTCTCCAAAGGAACCGTGGTTCATCATGGTAGCGTTGCCACCTTGCACGCGTTCTTGCACTCCAGTGGCTTCACTGTTCCTCACCAACTCAACGCGCTGGAATATGCTATGGAGATTTTGAGCCAGTTGAATGAGGTGAAGCCTGTTACTCCCCCGAGTATTCCTGAATCGCCTCAAAGTTCAATTTCAACGAGTTCCGTTTCTGAGGGTGGAGCTAGGAGTAGTAGAGAGATCATCAGGTATAGAAGCTCTAGGGTTCATGAGATTTTCACTCTTTATAGCAGGTTTTGGAAGATTATCTACAGAACTAGACAACTTCTTTTGACCAACACAGCTGAAGCACTTCTCGTGGGGCTTGTGTTGGGAACTATTTATATCAATATAGGGTTTGATAAAGAAGGGATTGAGAAAAGGTTTGGTCTCTTTGCCTTCACTCTCACGTTTCTCTTATCCTCCACAACTGAAACCCTTCCTATTTTCATCAACGAGAGACCGATCTTGTTGAGAGAAACTTCGAGTGGGGTTTATAGGCTTTCGTCTTATCTCATTGCAAACACGCTTGTTTTCTTGCCCTACTTGTTCGTTATTGCTGTTATATATTCTATTCCAGTTTATTTCTTGGTGGGTCTTTGTGCTTCGTGGCTTTCTTTTGCTTACTTTGTTTTGGTCATTTGGGTCATTGTTCTCATGGCAAACTCGTTCGCTCTCTTCTTGAGCTCTCTTGCACCGAACTACATTGCTGGGACTTCGCTCCTAACGGTGCTTCTCGCAGCGTTTTTTCTCTTCTCTGGGTATTTTATCTCCAAGGAAAGCTTGCCCAAGTACTGGCTCTTCATGCATTTCTTCTCTATGTATAAATACGCTCTTGATGCCCTTCTCATCAACGAGTACTCGTGTTTGGTGTCACGGTGTTTGATATGGTACCAAGAGAATGAACAGTGCATGGTGACTGGTGGTGACGTGTTGCAGAAGAGAGGGCTCAAGGAGAGTGAAAGGTGGACCAACGTGTACTTCTTGCTCGGGTTCTTTCTGCTGTATCGTGTGCTTTGCTTCTTGGTTTTGGCTAGAAGGGTTTCAAGATCGAAAACTTAA 1806 0.4994 MEDPSESPPPLKTYKLTATSISYTKSTTTKPSFSSLFFTACTNTPPTYILKDISLTALPSQILAVVGPSGAGKSTLLDILAARTLPSHGTLLLNSAPLVPSTFRKLSSYVPQHDHCLPLLTVSETFLFAAKLLKPKTSNLAATVSSLLSELRLTHLSNTRLAHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMRILKQTCTTRNRTIILSIHQPSFKILACIDRILLLSKGTVVHHGSVATLHAFLHSSGFTVPHQLNALEYAMEILSQLNEVKPVTPPSIPESPQSSISTSSVSEGGARSSREIIRYRSSRVHEIFTLYSRFWKIIYRTRQLLLTNTAEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLFVIAVIYSIPVYFLVGLCASWLSFAYFVLVIWVIVLMANSFALFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFFSMYKYALDALLINEYSCLVSRCLIWYQENEQCMVTGGDVLQKRGLKESERWTNVYFLLGFFLLYRVLCFLVLARRVSRSKT 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01534 601 MobiDBLite consensus disorder prediction 288 307 - -
Gma20g01534 601 SMART AAA_5 59 243 IPR003593 -
Gma20g01534 601 ProSitePatterns ABC transporters family signature. 165 179 IPR017871 GO:0005524
Gma20g01534 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 5 596 - -
Gma20g01534 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 596 - -
Gma20g01534 601 Pfam ABC transporter 50 193 IPR003439 GO:0005524
Gma20g01534 601 Pfam ABC-2 type transporter 326 535 IPR013525 GO:0016020|GO:0140359
Gma20g01534 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 257 IPR027417 -
Gma20g01534 601 Gene3D - 32 285 IPR027417 -
Gma20g01534 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 266 IPR003439 GO:0005524
Gma20g01534 601 Pfam ABC-2 type transporter 223 283 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01534 Gma-Chr20 42350690 42352602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01534 45 322 Calmodulin-binding Proteins AT2G36910 27.431 6.84e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01534 K05681 - gmx:100790712 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02184 10 49436919 49438817 Gma20g01534 20 42350690 42352602 GST