Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01530 ATGGCTGAGGACTGGGATCTCTTTGCCATCGTGAGAAGCTGCCAATCAGCCACCACCACAATTCCACAAACCACCACCAATAATACTTCCTCTCCCTTGATCACTTCCACTGTAAAGGAAGAAAACTATGATGGATTTTCCTTTCCCAATATAGTGCAACCCATAACCAATGAGTTTCAAGCGCTACACCAACTGTTCACACCCTTTAACCCCACCACCAACACCACTAACACTAGTGCTTCTGGCATCAATCCCAATTCCCCTTATTTTGCAGAACAGGAAAGCCAGCAAATTAGTGAGCACCTTCCTATTTGGCCTCATTTCGTGCCAGAACACTCTTCCACTCCCAGTTTCAGTAGATTCCATGACCATCAACAACAACAGCAACAGATCAATCAACTACAGGCACTTCAGAAACACGAATTTCAACTGCCCCAGAACAATTCCCCCACAGTTTCACCAAACGCACAACCTCAAACACCCAAATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTATGCCATGTAACCGCAGATAACCTCTCAGCAGATTTGTGGGCATGGCGAAAATACGGACAAAAACCAATTAAGGGTTCTCCATATCCAAGGAATTACTATAGGTGCAGCAGCTCCAAAGGTTGTATGGCTCGAAAACAAGTTGAACGGAGTAACACTGAACCCGACATGTTCATCGTTACGTACTCCGGAGACCATTCCCATCCCCGGCCAACCCACCGGAATTCGCTCGCCGGAAGTACCCGGAATAAGATTCCGGCGACCAATCCGCTACCGTCACCTGGGTCACTCTCCTCCTTCCAAGCCACGCCCTTTTCTTCTTCTTCTTCTTCGCCACCGCACTCTCCGACGTCGCCGTCGGAGGAGCCACCGGAAACCGGCGATTTAGAACCCGACCCGGATATGGAAACCGATGGGGACGATGACGGTGACATTCAAATACAATAA 966 0.4814 MAEDWDLFAIVRSCQSATTTIPQTTTNNTSSPLITSTVKEENYDGFSFPNIVQPITNEFQALHQLFTPFNPTTNTTNTSASGINPNSPYFAEQESQQISEHLPIWPHFVPEHSSTPSFSRFHDHQQQQQQINQLQALQKHEFQLPQNNSPTVSPNAQPQTPKSRKRKSQQKKMVCHVTADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCMARKQVERSNTEPDMFIVTYSGDHSHPRPTHRNSLAGSTRNKIPATNPLPSPGSLSSFQATPFSSSSSSPPHSPTSPSEEPPETGDLEPDPDMETDGDDDGDIQIQ 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01530 321 Gene3D WRKY domain 166 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma20g01530 321 Pfam WRKY DNA -binding domain 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma20g01530 321 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 299 IPR044810 GO:0003700
Gma20g01530 321 MobiDBLite consensus disorder prediction 234 321 - -
Gma20g01530 321 ProSiteProfiles WRKY domain profile. 178 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma20g01530 321 MobiDBLite consensus disorder prediction 298 321 - -
Gma20g01530 321 SMART WRKY_cls 183 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma20g01530 321 MobiDBLite consensus disorder prediction 145 163 - -
Gma20g01530 321 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 3 299 - -
Gma20g01530 321 MobiDBLite consensus disorder prediction 145 173 - -
Gma20g01530 321 MobiDBLite consensus disorder prediction 246 288 - -
Gma20g01530 321 SUPERFAMILY WRKY DNA-binding domain 178 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01530 Gma-Chr20 42322706 42324676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01530 162 315 WRKY Transcription Factor Family AT5G52830 62.821 1.05e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma20g01530 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01530 K13425 - gmx:100792164 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02188 10 49465910 49467025 Gma20g01530 20 42322706 42324676 GST
Gma16g01529 16 35634549 35636080 Gma20g01530 20 42322706 42324676 PCT
Gma09g01229 09 33848007 33849458 Gma20g01530 20 42322706 42324676 PCT
Gma20g01530 20 42322706 42324676 Gma16g01529 16 35634549 35636080 PCT
Gma20g01530 20 42322706 42324676 Gma09g01229 09 33848007 33849458 PCT