Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01523 ATGGCGGCAGGACTCTCCACCGCCGCAAACTTAAAGCCCTACAATCTCCTCCAACCCCCAATCCCTATATCTAAACCAACCCCACCACTCTTCTTCAACCCCTTAAGATGTTTCCGTCGCAGTACAATCCTTCGAGTTCGACCCAGAAGAAGAAGAATGAGTGGCTTCACCGTTTGCGTCCTCACGGAGGATCCCAAACAGATAAAAAAGGATGAACAAGAAGAACAAGTGAATCCTCAAGTTGTGTCGGCACGAGTGGCAGAGAAATTGGCGAGAAAGAAGTCCCAGAGGTTCACCTATCTCGTTGCGGCTGTCATGTCTAGCTTTGGCATCACCTCTATGGCAGTCTTCGCAGTTTATTATAGATTCTCTTGGCAAATGGAGGGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTCGGTGCTGCTGTGGCTATGGAACTTTGGGCAAGATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGTCACACCATCGACCAAGAGAGGGACCGTTCGAGCTTAACGACGTTTTTGCGATAATTAACGCTGTCCCTGCGATCGTTCTTCTCTCATACGGTTTTTTCCACAAGGGTCTGGTCCCTGGCCTCTGTTTTGGTGCAGGCCTTGGAATCACGGTGTTTGGGATGGCCTACATGTTTGTCCACGATGGATTGGTTCATAAGAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTACTTTAGAAGAGTTGCTGCTGCTCACCAACTCCACCATTCGGACAAATTCAACGGGGTGCCATATGGCTTGTTTTTGGGACCAAAGGAAGTTGAAGAAGTGGGAGGGCTGGAAGAGCTAGAGAAAGAGATAAGTAGGAGAATGAGGTCCGGTTCATGA 906 0.4967 MAAGLSTAANLKPYNLLQPPIPISKPTPPLFFNPLRCFRRSTILRVRPRRRRMSGFTVCVLTEDPKQIKKDEQEEQVNPQVVSARVAEKLARKKSQRFTYLVAAVMSSFGITSMAVFAVYYRFSWQMEGGDVPWSEMLGTFSLSVGAAVAMELWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIVLLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKEVEEVGGLEELEKEISRRMRSGS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01523 301 PANTHER BETA-CAROTENE HYDROXYLASE 20 298 - -
Gma20g01523 301 Pfam Fatty acid hydroxylase 147 274 IPR006694 GO:0005506|GO:0008610|GO:0016491
Gma20g01523 301 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 20 298 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01523 Gma-Chr20 42270346 42273998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01523 1 217 Chloroplast and Mitochondria Gene Families AT4G25700 58.261 3.19e-86 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01523 K15746 - gmx:100802778 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02197 10 49536197 49545595 Gma20g01523 20 42270346 42273998 GST
Gma16g01542 16 35769939 35772668 Gma20g01523 20 42270346 42273998 PCT
Gma09g01261 09 34411572 34414253 Gma20g01523 20 42270346 42273998 PCT
Gma20g01523 20 42270346 42273998 Gma16g01542 16 35769939 35772668 PCT
Gma20g01523 20 42270346 42273998 Gma09g01261 09 34411572 34414253 PCT