Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01520 ATGAACACCCAAAACCTGATACCCTTTATCCTTCTTCTTTTCATACCTTTCTCAGTTTCATTCTCTACCACAGATAACTTTCTTCTTAGTTGTGGATCACACAGCAATGCTTCCCTCTTCAACCGTGTCTTCGTGGGAGATTCCACTGACTCAGGCTCCACTTTTCTATCTTCAGGTGATTCCATTTCACTCACATACCAAAAGCCACCTCAAAATTTGCCTACTTTATACCACACAGCCAGACTTTTCAGAAGCACTGGGAGGTACAGGTTCAACATGAAGAAAAACGGCACCCACTTGGTACGTTTTCATTTCTCCCCCTTCAAGGCTCAAAGTTTTGATCTTAAATCAGCAAAATTTAACGTCTCTGTTAACGGGGTTTCGGTGTTGAGCAATTTCCAACCACCTAATGATGTGTTGCTCAAAGAGTTTATTTTGAAGATTGTGTCAAACGTGCTTGAGATTTTGTTTAGGCCTGTTGGTGACTCAGGTTTTGCCTTTGTCAATGCCTTGGAGGTGTTTACTGCCCCTGTGGATTTTGTTATAGATTTTGGAGCCAGGTTGGTTGGTCCTTCTGGGGTGGAGGAGTACAGAAGCCTTTCATCTCAGGTTTTGGAAACTGTTCATAGGATCAATGTTGGGGGTTTGAAAATAACTCCCTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATCTGGTGTTTAAGGGTGCTGCAAAGCCTGCAGTGAGCACTCACACACCAAATTACCAGAAGGGAGGTGCAACTAGAGAGATTGCACCTGAAAATGTTTACATGACAGCTCAGCAGATGAATAGGGAAAACTCAAGTTTGGCTTCAAGGTTCAACATAACCTGGAACTTCCCTGTGTCTCCTGGTGGTGTTCCACACTTGGTTAGGTTGCATTTTTGTGATATTGTTAGTCCTGCTCTCAACTTGCTCTACTTTGATGTGTACATCAATGGGTACATTGCATACAAGGATCTTGATTTGTCAGCCCTTGCAATCCACACACTTGCATCACCTGTCTATGTGGATTTTGTTACAAATTCAGATGACACAGGTTTTGTTCAAGTGAGTGTTGGTCCTTCTGAGCTGAGCAGTTCCATAAGGATGAATGCCATATTGAATGGTGCAGAGATAATGAAGATGGTCAATGATGTCGGTACTAATGTTGTGCATAGGAGGAAGAATCTGTGGGTGTTGGTGGGTTCAATTGCTGGAGGAATTGTTGTCTTGTTTTTAGTTGTAACTGCTTTTCTACTTGGTACCAAATGCAGGAACAAGAAACCGAAACAAAGGACAGTAGAAAGTGTTGGATGGACACCTTTGAGTATGTTTGGAGGGAGCTCCCTTAGTAGAAGCTCTGAGCCTGGTTCTCATGGACTTCTTGGCATGAAGATCCCTTTTGCTGAAATACAATCAGCAACAAACAACTTTGATAGAAATCTGATTATAGGGTCTGGTGGATTTGGTATGGTCTACAAGGGAGAACTGAGAGACAATGTGAAGGTTGCTGTCAAGAGAGGCATGCCAGGGTCCAGACAAGGCCTTCCTGAGTTCCAGACTGAGATAACAGTTCTGTCCAAAATTCGCCATCGCCACCTCGTTTCACTAGTTGGTTTCTGTGAAGAGAATTCAGAAATGATACTTGTCTATGAGTATGTTGAAAAGGGTCCACTGAAGAAGCATTTATATGGTTCATCACTACAAACACCTCTCTCTTGGAAGCAGCGTCTTGAAATATGCATTGGTGCGGCTAGAGGCCTTCACTATCTTCACACCGGTTTTGCTCAAGGAATCATCCACCGTGACATTAAGTCAACCAACATATTGCTTGATGAAAACTATGTGGCCAAGGTTGCTGACTTTGGTCTTTCAAGGTCAGGGCCATGCATCAATGAAACACATGTGAGTACTAATGTGAAAGGTAGCTTTGGTTATCTTGATCCCGAGTATTACCGGAGGCAGCAGCTTACAGATAAGTCAGATGTTTACTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGGAAGACCTGCTGTTGATCCACAACTTGCAAGAGAACAGGTGAATTTGGCAGAATGGGCACTTGAATGGCTGCAAAAGGGTATGCTGGAGCAAATTGTTGACCCTCATCTTGTTGGACAGATTCAACAAAGCTCCTTAAAGAAATTTTGTGAAACTGCAGAGAAATGTTTGGCCGAATACGGTGTTGACAGGCCAGCCATGGGTGATGTGTTGTGGAATTTGGAATATGCACTTCAGCTCCAAGAAAGTGAGCCACATGCCAATAGCAGTGCTAGGGAATCTGTGAGTGTGACAAATGCTGTTATTCCTGGAAATCCTTCTACCAACAGAAGGACAGAGAGGGATTATTATAACTGTTCTTCAGATGTAAGTACTAGCCAAGTGTTTTCCCAGTTAATGAACAATGAAGGCAGATAG 2457 0.4306 MNTQNLIPFILLLFIPFSVSFSTTDNFLLSCGSHSNASLFNRVFVGDSTDSGSTFLSSGDSISLTYQKPPQNLPTLYHTARLFRSTGRYRFNMKKNGTHLVRFHFSPFKAQSFDLKSAKFNVSVNGVSVLSNFQPPNDVLLKEFILKIVSNVLEILFRPVGDSGFAFVNALEVFTAPVDFVIDFGARLVGPSGVEEYRSLSSQVLETVHRINVGGLKITPFNDTLWRTWIPDEDYLVFKGAAKPAVSTHTPNYQKGGATREIAPENVYMTAQQMNRENSSLASRFNITWNFPVSPGGVPHLVRLHFCDIVSPALNLLYFDVYINGYIAYKDLDLSALAIHTLASPVYVDFVTNSDDTGFVQVSVGPSELSSSIRMNAILNGAEIMKMVNDVGTNVVHRRKNLWVLVGSIAGGIVVLFLVVTAFLLGTKCRNKKPKQRTVESVGWTPLSMFGGSSLSRSSEPGSHGLLGMKIPFAEIQSATNNFDRNLIIGSGGFGMVYKGELRDNVKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSLQTPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLAREQVNLAEWALEWLQKGMLEQIVDPHLVGQIQQSSLKKFCETAEKCLAEYGVDRPAMGDVLWNLEYALQLQESEPHANSSARESVSVTNAVIPGNPSTNRRTERDYYNCSSDVSTSQVFSQLMNNEGR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01520 818 Pfam Malectin-like domain 29 387 IPR024788 -
Gma20g01520 818 Gene3D - 26 179 - -
Gma20g01520 818 Gene3D - 204 389 - -
Gma20g01520 818 Gene3D Transferase(Phosphotransferase) domain 1 559 781 - -
Gma20g01520 818 ProSiteProfiles Protein kinase domain profile. 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01520 818 Pfam Protein tyrosine and serine/threonine kinase 488 684 IPR001245 GO:0004672|GO:0006468
Gma20g01520 818 SUPERFAMILY Protein kinase-like (PK-like) 470 756 IPR011009 -
Gma20g01520 818 PANTHER OS07G0166700 PROTEIN 15 769 IPR045272 GO:0004714|GO:0006468
Gma20g01520 818 Gene3D Phosphorylase Kinase; domain 1 456 558 - -
Gma20g01520 818 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Gma20g01520 818 CDD STKc_IRAK 489 755 - -
Gma20g01520 818 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 769 - -
Gma20g01520 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Gma20g01520 818 SMART serkin_6 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01520 818 MobiDBLite consensus disorder prediction 765 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01520 Gma-Chr20 42251663 42254407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01520 1 818 Receptor kinase-like Gene Family AT3G46290 48.288 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma20g01520 Malectin_like 6.5e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01520 - - gmx:100801169 1606.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02199 10 49554220 49556565 Gma20g01520 20 42251663 42254407 GST
Gma16g01547 16 35813007 35814385 Gma20g01520 20 42251663 42254407 PCT
Gma09g01268 09 34584533 34587046 Gma20g01520 20 42251663 42254407 PCT
Gma20g01520 20 42251663 42254407 Gma16g01547 16 35813007 35814385 PCT
Gma20g01520 20 42251663 42254407 Gma09g01268 09 34584533 34587046 PCT