Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01511 ATGCTTACATGGTGGGGAAAATCATCATCAAAAGAAACCAAGAAGAAAGCAAATAAGGAAAGTTTCTTTGACACACTGCACCGAAAACTTAGAATTTCATCCAAAGGTAAAGTAAGCATTAGATCTGGAGGATCACGTAGACATTGCAATGACACAATTTCAGAGAAGGGAGATCATTCTCCATGTGGATCAAGATCGCCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTATTGATAGGCCTCATGCTCAGCCACTTCCACTTCCTGGTCTGCATCCTTCAAGTGTAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGATTGGAAAAAGTCTCCAAGCCATTATCGTTTCTTACGCTTCCAACACCTGGATGCATACGTTGTAGGCCAAACCCTGCAGATTTGGATGGAGATATGGTCACTGCTTCAGTCTTTAGTGATTGCTCTGCTGACAGTGATGAGCCGGCAGACTCACACAATCGTAGTCCTCTAGCAATTGACTGTGAGACTGGGACTAGAACTGCTGCTGGCAGTCCTTCCAGCTTAATGCTCAAGGATCAACCACCTGCTGTTTCCCAACTGAATTCAACGGGAGTAAAGAAACCAGGAAATATTCTAAGTAATCATATGTCTTCTACTTCACCAAAACGTAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTGCCTTCTATAGTGCTCCTGATAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGGGCATTTGGCACAGATCAGGTGTTGAATTCTGCTTTTTTGGCTGGAAAGCCATATCCAGAGATCAATTTTGTTGGGTCTGGGCATTGCTCTAGTCCAGGTTCAGGTCACAATTCTGGGCACAATTCAATGGGAGGGGACATGTCAGGACCGTTACTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCCAAAGCCGGGGGAACACCCACAGAATCACAGACTCATCGATTGCCTCTTCCTCCTTTGTCAGTTTCTAATTCCTCACTGTTCTCTCATTCAAATTCTGCAGCAACATCTCCGTCTATGCCAAGAAGTCCAGCTAGAGCAGATAATCCAAACTCTGGCTCACGTTGGAAGAAAGGGAAGCTGCTTGGCAGCGGCTCATTTGGACATGTCTATCTTGGCTTCAATAGTGAAAGAGGCGAAATGTGTGCAGTGAAGGAGGTTACCCTGTTTTCAGATGATCCCAAGTCTATGGAAAGTGCGAAGCAATTTATGCAGGAAATTCATTTATTAAGCCGCTTACAGCATCCAAATATTGTCCAGTATTATGGTTCTGAAACAGTCGATAACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCGAGAATATGGGCAATTTGGTGAACTAGTTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTGCATGCTAAAAATACTCTCCATAGGGATAtcaaaggagcaaatatactggtagatccaactggtcgggtcaagttggcagactttggcatggcaaaacatATAACAGGGCAATCGTGCCCATTGtcattcaagggaacaccttactggatggctcctgaggttataaaaaattctaatggatgcaaccttgcggtggatatatggagtcttggatgcacagttttggaaatggctacaaccaaacctccttggtttcagtatgaagggGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACCATCCCTGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTCTTCAGCGTAACCCACATGATCGTCCTTCAGCCAGTGAATTGTTGGACCACCCCTTTGTAAAAAATGCTGCACCTTTGGAAAGACCTATTCCGGCTCCTGAAGCTTTGGACCCTGTTTCTGGGATTACACAGGGAGCAAAAGCTCTGGCTATTGGACAAGGAAGGAATCTTTCTAGCTTGGATTCAGATAGACTTTCTGTTCATTCTTCTAGATTTTTGAAAACTAATCCTCATGAAAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTTTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACAGCACAGGAATGGGAAAATGTCTCCTTCTCCTATATCTAGCCCTCGGACTGCTTCTGGGGCATCTACACCTCTTGCTGGTGGCAGTGGTGCCATTCCATTTGGTAATCACTCTAAACAGTCCATTTACTTTCAAGAGGGTTTTGGAAGCATTCCCAAGTCCTCAAATGGTGTCTACATGAATGGCCATTCTCATCACGACTCGAATGTTGACATTTTTCGAGGAATGCAAATGGGGTCTCACATTTCACCAGAACTGGTTTCCAGTGAAAATGATGTTTTGGTTAAGCAGTTTGCAAGGCATCCTCATGCAGAGCCATATGATTTTCAGTCGGTCTTGGCAGATCGTGTTGGCCGGCAGCTGCTGGGGGAACATGTTAAGATTAACCCATCCATTGATCTCAGTCCCAACTCGTCTTTGCTTAGCCGGCCAAACGGTTTATGA 2667 0.4057 MLTWWGKSSSKETKKKANKESFFDTLHRKLRISSKGKVSIRSGGSRRHCNDTISEKGDHSPCGSRSPSPSKVARCQSFIDRPHAQPLPLPGLHPSSVGRVDSEISISSKSRLEKVSKPLSFLTLPTPGCIRCRPNPADLDGDMVTASVFSDCSADSDEPADSHNRSPLAIDCETGTRTAAGSPSSLMLKDQPPAVSQLNSTGVKKPGNILSNHMSSTSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFLAGKPYPEINFVGSGHCSSPGSGHNSGHNSMGGDMSGPLLWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPKAGGTPTESQTHRLPLPPLSVSNSSLFSHSNSAATSPSMPRSPARADNPNSGSRWKKGKLLGSGSFGHVYLGFNSERGEMCAVKEVTLFSDDPKSMESAKQFMQEIHLLSRLQHPNIVQYYGSETVDNKLYIYLEYVSGGSIHKLLREYGQFGELVIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSFKGTPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWFQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPHDRPSASELLDHPFVKNAAPLERPIPAPEALDPVSGITQGAKALAIGQGRNLSSLDSDRLSVHSSRFLKTNPHESEIHIPRNISCPVSPIGSPLLRSRSPQHRNGKMSPSPISSPRTASGASTPLAGGSGAIPFGNHSKQSIYFQEGFGSIPKSSNGVYMNGHSHHDSNVDIFRGMQMGSHISPELVSSENDVLVKQFARHPHAEPYDFQSVLADRVGRQLLGEHVKINPSIDLSPNSSLLSRPNGL 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01511 888 MobiDBLite consensus disorder prediction 177 223 - -
Gma20g01511 888 SMART serkin_6 400 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01511 888 MobiDBLite consensus disorder prediction 285 402 - -
Gma20g01511 888 Pfam Protein kinase domain 401 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01511 888 CDD STKc_MEKK1_plant 399 656 - -
Gma20g01511 888 MobiDBLite consensus disorder prediction 34 72 - -
Gma20g01511 888 MobiDBLite consensus disorder prediction 152 253 - -
Gma20g01511 888 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 802 - -
Gma20g01511 888 MobiDBLite consensus disorder prediction 1 20 - -
Gma20g01511 888 MobiDBLite consensus disorder prediction 735 765 - -
Gma20g01511 888 MobiDBLite consensus disorder prediction 57 72 - -
Gma20g01511 888 ProSiteProfiles Protein kinase domain profile. 400 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01511 888 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 802 - -
Gma20g01511 888 Gene3D Transferase(Phosphotransferase) domain 1 397 671 - -
Gma20g01511 888 MobiDBLite consensus disorder prediction 348 394 - -
Gma20g01511 888 MobiDBLite consensus disorder prediction 285 300 - -
Gma20g01511 888 SUPERFAMILY Protein kinase-like (PK-like) 384 674 IPR011009 -
Gma20g01511 888 MobiDBLite consensus disorder prediction 720 773 - -
Gma20g01511 888 ProSitePatterns Protein kinases ATP-binding region signature. 406 429 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01511 Gma-Chr20 42179336 42187183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01511 2 877 MAP Kinase Kinase Kinase AT1G63700 57.848 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma20g01511 Pkinase 4.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01511 K20717 - gmx:100797994 1706.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01511 20 42179336 42187183 Gma16g01559 16 35995374 36003057 PCT
Gma20g01511 20 42179336 42187183 Gma09g01293 09 35163708 35169240 PCT