Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01496 ATGATCAAGATGAATCTCGCGTTCGCATTCTTGTGTCTATTCACGGTGGAGCCATGGCGCGTTTGCTCGCAACAACAACAACAGAGGCTTCTCGTGAACATGACGCTCGTTCCAAGCGCTCGTGCTAGTGGCGCTCtttgtttggacggaagtttaccggcgtatcacttgcacagaggatttggagctggtaaagacaactggcttctacaatttgagGGAGGTGGATGGTGTAATGACTTGAAATCATGCTTGGATAGAGCCAAAACTCGGAGGGGTTCAACACGTTATATGACCAAGTGGGAGGTGTTCTCCGGTATTTTAAGCAATAATGCCACCCTTAATGCAGatttttacaattggaaccgtgtgaagctgagatattgtgatggggcttcatttactggagatgCTGTGTTCACTAACAAGACAACAACTCTTCATTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCGCGACCTTTTACCACTGGGTTTGGGAAAGGCACGGAAGGCTTTGCTTTCAGGTTGCTCAGCAGGAGGTTTAGCGACCTTTCACCATTGTGACAACTTCGCCAAGTATTTGCCAACGAATGCTAGTGTTAAATGCTTGAGTGATGCCGGTTTTTTTCTTGACGAAAGAGATATCAGTTTGAATCATACTATGAGGTATAATTTCAAAAGTCTAGTTCAATTGCAGGGGATAGAGAAGAACCTGAATGGAAATTGTACCAGAGCACTGTACTTTCCTGACTTGtgcttctttccacaatatgcgttgagatacatatcaacgccatattttattttgaactctgcctacgatgtattccagTTCAGTCATATTTTGGTGCCACCCTCTGCTGATATGCACGGACACTGGAAACAATGCAAGGCGAACCTGGCGGAGTGTACAGCAGACCAAATTGATACACTGCAAGGTTTTAGGCTTGACATGCTTGGAGCTTTGAGACCGTTCTATATGAATTCAAGAAGAGGGgggatgttcataaattcatgttttgctcattgccagagtgaactacaagaaacatggtttggggatgattctcCAAGAATAAACAATAAGACTATTGCAGAAGCGATTGGTGATTGGTATTTTAGTAGAAACATAAGCAAGGAAATAGATTGTGCATATCCTTGTGATGCAACTTGTCATAATCTTATACCGTAA 1197 0.3283 MIKMNLAFAFLCLFTVEPWRVCSQQQQQRLLVNMTLVPSARASGALCLDGSLPAYHLHRGFGAGKDNWLLQFEGGGWCNDLKSCLDRAKTRRGSTRYMTKWEVFSGILSNNATLNADFYNWNRVKLRYCDGASFTGDAVFTNKTTTLHFKGQKIWEAIIRDLLPLGLGKARKALLSGCSAGGLATFHHCDNFAKYLPTNASVKCLSDAGFFLDERDISLNHTMRYNFKSLVQLQGIEKNLNGNCTRALYFPDLCFFPQYALRYISTPYFILNSAYDVFQFSHILVPPSADMHGHWKQCKANLAECTADQIDTLQGFRLDMLGALRPFYMNSRRGGMFINSCFAHCQSELQETWFGDDSPRINNKTIAEAIGDWYFSRNISKEIDCAYPCDATCHNLIP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01496 398 PANTHER NOTUM-RELATED 24 398 IPR004963 GO:0016787
Gma20g01496 398 PANTHER PECTIN ACETYLESTERASE 9 24 398 - -
Gma20g01496 398 Pfam Pectinacetylesterase 25 378 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01496 Gma-Chr20 42073008 42083007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01496 1 398 Carbohydrate Esterase AT5G23870 65.250 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01496 K19882 - gmx:100794453 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02224 10 49788474 49797201 Gma20g01496 20 42073008 42083007 GST