Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01467 ATGGCTCTACCTTTCAACCTCGTACTCTCATACCTCGTCGTGTTCCACATTTTTTTGTGCACCACTGCAGACCAAAGCAACGACAGGCTTTCCCTCCTTTCCTTCAAAGACGGTCTCCAAAACCCTCACGTGCTAACCTCATGGCACCCTTCAACGCTGCACTGCGACTGGCTCGGCGTCACGTGCCAACTCGGCCGAGTCACCTCGCTCTCTCTTCCCAGCCGCAACCTCAGAGGAACACTCTCCCCGTCGCTGTTTTCTCTGTCTTCACTCTCTCTCCTCAACCTCTGTGACAACCAGCTCTCCGGCGAGATCCCCAGCGAGCTTGGCGGGCTGCTTCAGCTCCAAACTCTCAGACTCGGCTCCAACTCGCTCGCCGGAAAAATCCCACCGGAGGTGGGACTCCTGACAAAACTCCGCACCCTCGACCTCTCCGGCAACTCCCTCGCCGGAGAAGTGCCGGAGAGTGTTGGAAACTTGACAAAGCTTGAGTTTCTCGACCTGAGTAACAATTTTTTCTCCGGTTCTCTTCCGGTGAGTCTGTTCACCGGAGCGAAGTCTTTGATTTCCGCTGATATCTCGAACAACTCGTTTTCCGGCGTAATCCCTCCGGAAATCGGGAACTGGAGGAACATCAGTGCCCTTTACGTGGGGATTAACAAGTTGTCTGGGACTTTGCCTAAGGAAATTGGGTTACTTTCAAAACTTGAAATTTTGTACTCCCCTTCCTGTTCCATCGAAGGTCCTTTGCCTGAGGAAATGGCGAAGCTGAAATCGTTGACTAAACTTGACCTTTCTTACAACCCCTTGAGGTGTTCGATTCCCAAGTTCATTGGGGAGTTGGAGAGTTTGAAAATTTTGGACCTTGTCTTCGCCCAGCTTAATGGGTCGGTGCCGGCTGAGCTTGGGAATTGTAAGAATTTAAGGTCTGTGATGCTCTCTTTCAATTCACTTTCTGGGTCACTGCCTGAGGAGCTTTCTGAGCTTCCTATGTTAGCCTTTTCTGCTGAGAAGAATCAGCTTCATGGACATTTGCCTTCTTGGCTTGGAAAGTGGAGCAATGTTGATTCTCTTTTGCTCTCTGCTAACCGTTTCTCTGGGATGATTCCACCTGAGCTTGGGAATTGTTCTGCGTTGGAGCACCTCAGTTTGAGCAGTAATTTGTTGACAGGTCCCATTCCTGAGGAGCTTTGTAATGCTGCCTCACTTTTGGAGGTTGATCTTGATGACAACTTTCTCTCTGGTGCTATTGATAATGTGTTTGTTAAGTGTAAGAACCTTACTCAGTTGGTTTTGCTGAATAACCGGATTGTTGGTTCTATACCTGAGTATCTTTCTGAGCTTCCCTTGATGGTGCTGGACCTTGATTCCAACAATTTTAGTGGGAAGATGCCTTCTGGTCTGTGGAATTCATCAACCCTGATGGAATTCTCTGCTGCTAATAACCGTTTGGAGGGTTCTCTTCCTGTGGAGATTGGGAGTGCGGTTATGCTGGAGAGGCTTGTTCTTAGCAACAATCGACTGACAGGTACTATACCTAAGGAAATTGGGAGTCTCAAAAGTCTTTCAGTTCTTAATTTGAATGGGAATATGCTTGAAGGGAGTATTCCAACTGAGCTTGGTGATTGTACTTCCCTTACTACTATGGACCTTGGAAACAATAAGCTGAACGGGTCTATTCCCGAGAAACTGGTGGAACTAAGCCAATTGCAGTGCCTGGTTCTTTCTCACAATAAACTGTCTGGGTCTATTCCTGCCAAGAAATCTTCGTATTTTCGACAACTTAGCATCCCTGATTTGAGCTTTGTTCAGCACCTTGGTGTGTTTGATCTTTCTCACAACAGATTGTCTGGCCCCATACCTGATGAACTTGGGAGCTGTGTGGTGGTTGTGGATCTCTTGGTCAGCAACAACATGCTTTCTGGGAGCATTCCTAGATCACTCTCGCGCTTGACGAATCTTACGACCTTGGATTTGTCTGGCAACTTGTTGTCAGGTTCCATTCCCCAAGAGCTTGGAGGTGTCCTCAAACTCCAGGGTTTGTATCTGGGACAGAATCAGCTATCAGGTACCATCCCTGAAAGCTTTGGAAAGTTGAGTAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGTTGTCTGGTCCAATTCCGGTTAGTTTTCAGAACATGAAGGGGCTGACTCACTTGGACTTGAGCTCTAATGAGCTCAGTGGCGAGCTTCCATCCTCTCTTTCAGGAGTGCAAAGTCTTGTTGGGATTTATGTGCAGAATAACAGGATTTCTGGCCAAGTAGGGGATCTCTTCTCAAACTCCATGACTTGGAGGATTGAGACAGTGAATTTAAGTAACAACTGTTTCAATGGGAACTTGCCGCAGTCTTTGGGAAATCTTTCTTACTTGACAAATTTGGATCTTCATGGAAATATGTTAACTGGAGAGATTCCTTTAGACCTTGGGGATCTAATGCAACTGGAATACTTTGATGTTTCAGGTAACCAACTATCTGGAAGGATTCCAGACAAGTTATGCAGCCTAGTTAATCTGAATTACCTAGATTTGTCTCGAAATAGGTTGGAAGGGCCAATACCGAGAAATGGTATCTGCCAGAACCTATCCAGAGTTAGACTTGCAGGGAACAAAAACCTTTGTGGCCAGATGTTGGGTATAAATTGTCAGGATAAAAGCATTGGCAGATCAGTATTGTATAATGCATGGCGACTTGCTGTAATTACGGTTACAATCATATTGCTAACTCTAAGCTTTGCTTTTCTTCTGCATAAATGGATTAGCAGGAGGCAAAATGATCCTGAGGAGCTTAAGGAGCGCAAACTAAACAGTTATGTTGATCACAATCTTTATTTCTTGAGCAGTAGCAGATCAAAAGAACCTTTGAGTATCAATGTTGCAATGTTTGAGCAGCCTCTTCTGAAGTTAACTTTGGTGgatatccttgaagcaactgacaacttcagcaagacaaatataattggagatggagAGCCGACGGGACCGGATTTTAAAGAGATTGAAGGTGGAAACTTGGTTGGATGGGTTTGTCAGAAGATCAAGAAGGGGCAGGCTGCTGATGTTCTTGATCCAACAGTTCTTGATGCTGACTCGAAACAGATGATGCTTCAAATGCTGCAAATTGCTGGTGTGTGCATATCTGATAATCCTGCAAACAGGCCTACCATGCTTCAAGTGCACAAATTCTTGAAGGGGATGAAGGGAGAGTAG 3237 0.4507 MALPFNLVLSYLVVFHIFLCTTADQSNDRLSLLSFKDGLQNPHVLTSWHPSTLHCDWLGVTCQLGRVTSLSLPSRNLRGTLSPSLFSLSSLSLLNLCDNQLSGEIPSELGGLLQLQTLRLGSNSLAGKIPPEVGLLTKLRTLDLSGNSLAGEVPESVGNLTKLEFLDLSNNFFSGSLPVSLFTGAKSLISADISNNSFSGVIPPEIGNWRNISALYVGINKLSGTLPKEIGLLSKLEILYSPSCSIEGPLPEEMAKLKSLTKLDLSYNPLRCSIPKFIGELESLKILDLVFAQLNGSVPAELGNCKNLRSVMLSFNSLSGSLPEELSELPMLAFSAEKNQLHGHLPSWLGKWSNVDSLLLSANRFSGMIPPELGNCSALEHLSLSSNLLTGPIPEELCNAASLLEVDLDDNFLSGAIDNVFVKCKNLTQLVLLNNRIVGSIPEYLSELPLMVLDLDSNNFSGKMPSGLWNSSTLMEFSAANNRLEGSLPVEIGSAVMLERLVLSNNRLTGTIPKEIGSLKSLSVLNLNGNMLEGSIPTELGDCTSLTTMDLGNNKLNGSIPEKLVELSQLQCLVLSHNKLSGSIPAKKSSYFRQLSIPDLSFVQHLGVFDLSHNRLSGPIPDELGSCVVVVDLLVSNNMLSGSIPRSLSRLTNLTTLDLSGNLLSGSIPQELGGVLKLQGLYLGQNQLSGTIPESFGKLSSLVKLNLTGNKLSGPIPVSFQNMKGLTHLDLSSNELSGELPSSLSGVQSLVGIYVQNNRISGQVGDLFSNSMTWRIETVNLSNNCFNGNLPQSLGNLSYLTNLDLHGNMLTGEIPLDLGDLMQLEYFDVSGNQLSGRIPDKLCSLVNLNYLDLSRNRLEGPIPRNGICQNLSRVRLAGNKNLCGQMLGINCQDKSIGRSVLYNAWRLAVITVTIILLTLSFAFLLHKWISRRQNDPEELKERKLNSYVDHNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATDNFSKTNIIGDGEPTGPDFKEIEGGNLVGWVCQKIKKGQAADVLDPTVLDADSKQMMLQMLQIAGVCISDNPANRPTMLQVHKFLKGMKGE 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01467 1078 SMART LRR_sd22_2 424 447 - -
Gma20g01467 1078 SMART LRR_sd22_2 797 818 - -
Gma20g01467 1078 SMART LRR_sd22_2 543 569 - -
Gma20g01467 1078 SMART LRR_sd22_2 845 873 - -
Gma20g01467 1078 SMART LRR_sd22_2 723 749 - -
Gma20g01467 1078 SMART LRR_sd22_2 136 162 - -
Gma20g01467 1078 SMART LRR_sd22_2 257 283 - -
Gma20g01467 1078 SMART LRR_sd22_2 651 674 - -
Gma20g01467 1078 PANTHER OS01G0515300 PROTEIN 88 361 - -
Gma20g01467 1078 PANTHER OS01G0515300 PROTEIN 337 587 - -
Gma20g01467 1078 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Gma20g01467 1078 Pfam Leucine Rich Repeat 726 746 IPR001611 GO:0005515
Gma20g01467 1078 PANTHER OS01G0515300 PROTEIN 598 729 - -
Gma20g01467 1078 PANTHER OS01G0515300 PROTEIN 678 999 - -
Gma20g01467 1078 PANTHER OS01G0515300 PROTEIN 20 144 - -
Gma20g01467 1078 PANTHER OS01G0515300 PROTEIN 158 475 - -
Gma20g01467 1078 SUPERFAMILY L domain-like 337 621 - -
Gma20g01467 1078 SMART LRR_typ_2 257 281 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 723 747 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 160 184 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 567 594 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 797 821 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 376 400 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 519 543 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 136 159 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 651 675 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 603 627 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 845 870 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 699 722 IPR003591 -
Gma20g01467 1078 SMART LRR_typ_2 88 112 IPR003591 -
Gma20g01467 1078 Pfam Leucine rich repeat 498 556 IPR001611 GO:0005515
Gma20g01467 1078 Pfam Leucine rich repeat 652 712 IPR001611 GO:0005515
Gma20g01467 1078 Pfam Leucine rich repeat 114 171 IPR001611 GO:0005515
Gma20g01467 1078 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Gma20g01467 1078 SUPERFAMILY L domain-like 592 884 - -
Gma20g01467 1078 Gene3D Ribonuclease Inhibitor 333 592 IPR032675 -
Gma20g01467 1078 Gene3D Ribonuclease Inhibitor 593 895 IPR032675 -
Gma20g01467 1078 Gene3D Ribonuclease Inhibitor 185 332 IPR032675 -
Gma20g01467 1078 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 598 729 - -
Gma20g01467 1078 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 337 587 - -
Gma20g01467 1078 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 144 - -
Gma20g01467 1078 SUPERFAMILY L domain-like 27 275 - -
Gma20g01467 1078 Gene3D Transferase(Phosphotransferase) domain 1 995 1078 - -
Gma20g01467 1078 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 158 475 - -
Gma20g01467 1078 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 88 361 - -
Gma20g01467 1078 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 678 999 - -
Gma20g01467 1078 PRINTS Leucine-rich repeat signature 726 739 - -
Gma20g01467 1078 PRINTS Leucine-rich repeat signature 845 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01467 Gma-Chr20 41830647 41834453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01467 23 999 Receptor kinase-like Gene Family AT5G07280 55.341 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01467 - - gmx:100780446 1901.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02252 10 50058497 50062306 Gma20g01467 20 41830647 41834453 GST