Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01465 ATGGAGGGCCCCAGTGAGATAGGTCTCATAGGGGAAAATTTTGATGCTGGTTTGATGGGGAGGATGAGGGACGATGAGTACGAGAGCCGTTCTGGAAGTGATAACTTTGAAGGCGCATCTGGTGATGATCAGGATGGTGGTGATGATCAGCCACAGAGGAAGAAGAGATACCACAGACACACTCCTCACCAAATTCAAGAGCTTGAGGCTTTCTTTAAGGAGTGCCCTCATCCTGATGAGAAGCAAAGGTTGGATCTCAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTCAAGTTCTGGTTTCAGAATCGACGAACCCAAATGAAGACCCAACTGGAACGCCATGAGAACATAATGCTTAGGCAGGAGAATGATAAGCTCAGAGCTGAGAACAGTTTGATCAAGGAAGCCATGTCAAATCCAGTGTGTAACAACTGCGGTGGCCCTGCAATTCCTGGCCAAATTTCATTTGAGGAGCACCAGATTAGAATTGAGAATGCCAGACTAAAGGATGAATTGAACCGTATATGTGTCCTAGCAAACAAGTTCCTTGGCAAGCCAATCTCATCATTGACCAGTCCCATGGCCCTCACAACCTCAAATTCTGGTCTTGAACTTGGTATTGGAAGGAATGGGATTGGTGGTTCAAGCACTCTTGGCACTCCCTTGCCAATGGGGCTTGATTTGGGAGATGGAGTGTTAGGCACTCAACCTGCAATGCCTGGGGTTAGATCAGCATTGGGTTTGATGGGAAATGAAGTTCAGCTTGAGAGATCTATGCTTATAGATCTTGCATTGGCTGCCATGGAGGAATTACTGAAGATGACTCAGGCAGAGAGCCCTCTTTGGATCAAGAGTTTGGATGGTGAGAAGGAAATCTTTAACCATGAGGAGTATGCAAGGTTGTTTTctccttgcattggtccaaaacccgctggctatgtaactgaagctacaagagaaactggaatagtaatcatcaacAGTTTAGCCCTTGTGGAAACTTTGATGGACGCGAATCGATGGGCAGAGATGTTTCCGTCTATGATTGCTAGAGCTATCAACCTCGATGTTATATCTAATGGCATGGGTGGAACAAGAAATGGTGCTCTACAAGTGATGCATGCTGAGGTTCAATTGCTTTCTCCACTAGTCCCCGTTCGTCAAGTAAGATTCATCAGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCTGTAGTTGATGTTTCCATTGAGATAGGTCATGATGCTGCTAATGCACAGCCATCCATTAGCTGTAGAAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCGAATGGTTACTCCAAGGTTACTTGGCTTGAGCATTGGGAGTACGATGAGAATGTTGTCCACCAACTTTATCGCCCGTTGCTAAGTTCTGGTGTTGGATTCGGTGCTCATAGATGGATTGCCACCCTCCAAAGGCAGTGTGAATGCTTGGCTATCCTAATGTCCTCTTCCATTTCAAGTGATAGTCACACAGCATTGAGCCAAGCTGGTAGGAGAAGCATGTTGAAATTGGCACAACGCATGACTAGCAACTTCTGTTCCGGGGTTTGTGCTTCGTCAGCTCGCAAGTGGGACAGCCTTCACATTGGGACTCTTGGTGATGACATGAAAGTGATGACAAGGAAAAACGTGGATGACCCTGGTGAGCCTCCTGGGATTGTGCTCAGTGCTGCAACTTCTGTTTGGATGCCAGTGTCACGGCAAAGGCTGTTCGACTTTCTGCGTGATGAACGGCTGAGAAGTGAGTGGGACATCTTGTCCAATGGTGGACCAATGCAGGAGATGGTACATATTGCCAAAGGACAAGGACATGGAAACTGTGTTTCTCTTCTCCGTGCTAATGCTGTTAACGCCAACGATAGCAGCATGCTGATTCTGCAAGAGACATGGATGGACGCGTCATGCTCAGTGGTGGTATATGCACCTGTTGACGTGCAATCACTGAACGTGGTGATGAGTGGTGGAGATTCTGCATACGTTGCACTCTTGCCTTCAGGCTTTGCAATTCTTCCCGATGGCCACTGCAACGACAACGGCTGCAACGGGAGTCTGCAGAAGGGCCGCGGCAGCGACGACGGCAGTGGCGGAAGCCTTCTCACAGTCGGTTTCCAAATTCTGGTGAATAGTCTCCCAACAGCAAAGCTCACAGTGGAGTCAGTGGACACTGTGAATAACCTCATCTCCTGCACCATTCAGAAGATCAAAGCTGCACTCAGAGTTGCATGA 2259 0.4635 MEGPSEIGLIGENFDAGLMGRMRDDEYESRSGSDNFEGASGDDQDGGDDQPQRKKRYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLIKEAMSNPVCNNCGGPAIPGQISFEEHQIRIENARLKDELNRICVLANKFLGKPISSLTSPMALTTSNSGLELGIGRNGIGGSSTLGTPLPMGLDLGDGVLGTQPAMPGVRSALGLMGNEVQLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEIFNHEEYARLFSPCIGPKPAGYVTEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIEIGHDAANAQPSISCRRLPSGCIVQDMPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSSSISSDSHTALSQAGRRSMLKLAQRMTSNFCSGVCASSARKWDSLHIGTLGDDMKVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRANAVNANDSSMLILQETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHCNDNGCNGSLQKGRGSDDGSGGSLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIQKIKAALRVA 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01465 752 Pfam START domain 264 487 IPR002913 GO:0008289
Gma20g01465 752 SMART HOX_1 52 115 IPR001356 GO:0003677
Gma20g01465 752 CDD START_ArGLABRA2_like 258 486 - -
Gma20g01465 752 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 5 750 - -
Gma20g01465 752 SUPERFAMILY Homeodomain-like 40 111 IPR009057 -
Gma20g01465 752 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 750 IPR042160 -
Gma20g01465 752 SMART START_1 263 487 IPR002913 GO:0008289
Gma20g01465 752 ProSiteProfiles START domain profile. 254 490 IPR002913 GO:0008289
Gma20g01465 752 SUPERFAMILY Bet v1-like 256 487 - -
Gma20g01465 752 ProSitePatterns 'Homeobox' domain signature. 86 109 IPR017970 GO:0000981|GO:0006355
Gma20g01465 752 Gene3D - 41 127 - -
Gma20g01465 752 ProSiteProfiles 'Homeobox' domain profile. 51 111 IPR001356 GO:0003677
Gma20g01465 752 Coils Coil 105 140 - -
Gma20g01465 752 SUPERFAMILY Bet v1-like 515 746 - -
Gma20g01465 752 MobiDBLite consensus disorder prediction 18 32 - -
Gma20g01465 752 Pfam Homeodomain 54 109 IPR001356 GO:0003677
Gma20g01465 752 MobiDBLite consensus disorder prediction 1 61 - -
Gma20g01465 752 CDD homeodomain 53 111 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01465 Gma-Chr20 41773776 41778533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01465 23 749 Homeobox Transcription Factor Family AT3G61150 63.079 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma20g01465 START 5.8e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01465 K09338 - gmx:100785102 1481.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02254 10 50103897 50109347 Gma20g01465 20 41773776 41778533 GST