Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01462 ATGGGTTTTCTCCGGCGAATTTTCGGCGCCAAAAAACCATCCGATTCCAAATCCGCCAAGAAAAGATGGACCTTCCTCAAACACACCGTCAGGAACAAGTCACTCCCGCCGCCACCGCCACCCTCCGCCGTCACTTACTTTGATTCCTCAACTCCCTTGGACGCCAACAAGCATGCCATCGCCGTCGCCGCCGCCACCGCCGCCGTAGCAGAGGCTGCTCTCGCCGCCGCCCACGCTGCTGCGGAGGTTGTCAGACTCACAAGCGGAGGCGTCTCCGCCACAAGCACCAGGCCCGCCGCTATGGCGGCGCGTGTTGGCAACCTTGAAACCGCCGCCGTTAGGATACAATCGGCGTTCCGTGGTTACTTGGTCCCTGAAGAATATGAACACCCACCTCGTGGCTTCAGTACAAAATTTGATGGATCTTCTATCCTTAAGAGATGTAGTTCCAATGCCAATTCTAGGAACGTTGACTCAGAACGAGCCAGGTTTGATTCCAACTGGTTAAACCGTTGGATGGAATTAGATAACAAGAGCAGCCAAACTGGAGATGCTTCATTGAAAAATGGACGCCCTGATGATGATAAAAGTGACAAGATTCTCGAAGTGGATACTTGGAGGCCACACTTCAAGTCTCACCACAGTAGCAGCTCCTTCCAAGCAGCACATTATTATTTGAGTTCTGATTACAATAATGAGAACTTTGGAGCGGCACATGAGTCTCCATCAAAACGTTCAGCAAAGGCTCTAAACCAAAGCTTCTCATCAAGGGAGGTGTTGCAGCTAAGCTCATTGAAGTTTCACAAAGGAAAAGAAGAAGCAAGTTCAAGAACTGCTGACAATAGTCCACAAACATTTTCTGCCAATTCTAGAAATGGAAGTGGTGCAAGAAGAGGAGGAGGACCCTTTACACCTACCAGGAGTGAGTGTTCGTGGGGTTTCCTCAGTGGCTACCCAGGTCACCCCAATTACATGGCAAACACTGAATCTTTTAGGGCTAAGGTTAGATCACAAAGTGCACCAAGACAAAGGCTGGAGTTTGACAGATACGGTTCCACTAGGAGGCCTGTTCATTTGGTGGGGTCTAATTCAGACCATGATTCAGATTTAAGGAACAAAGTCTTACCTGCCTTTAACCAAATGAACAGAATTGGGAGTAGCAACTTAAGGTGA 1173 0.491 MGFLRRIFGAKKPSDSKSAKKRWTFLKHTVRNKSLPPPPPPSAVTYFDSSTPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGVSATSTRPAAMAARVGNLETAAVRIQSAFRGYLVPEEYEHPPRGFSTKFDGSSILKRCSSNANSRNVDSERARFDSNWLNRWMELDNKSSQTGDASLKNGRPDDDKSDKILEVDTWRPHFKSHHSSSSFQAAHYYLSSDYNNENFGAAHESPSKRSAKALNQSFSSREVLQLSSLKFHKGKEEASSRTADNSPQTFSANSRNGSGARRGGGPFTPTRSECSWGFLSGYPGHPNYMANTESFRAKVRSQSAPRQRLEFDRYGSTRRPVHLVGSNSDHDSDLRNKVLPAFNQMNRIGSSNLR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01462 390 MobiDBLite consensus disorder prediction 277 294 - -
Gma20g01462 390 MobiDBLite consensus disorder prediction 179 198 - -
Gma20g01462 390 MobiDBLite consensus disorder prediction 268 303 - -
Gma20g01462 390 PANTHER IQ-DOMAIN 5-RELATED 1 123 - -
Gma20g01462 390 PANTHER IQ-DOMAIN 5-RELATED 140 388 - -
Gma20g01462 390 Pfam Protein of unknown function (DUF4005) 282 346 IPR025064 -
Gma20g01462 390 PANTHER CALMODULIN-BINDING PROTEIN 140 388 - -
Gma20g01462 390 PANTHER CALMODULIN-BINDING PROTEIN 1 123 - -
Gma20g01462 390 MobiDBLite consensus disorder prediction 1 22 - -
Gma20g01462 390 ProSiteProfiles IQ motif profile. 108 137 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01462 Gma-Chr20 41745716 41751180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01462 1 347 IQD Protein Family AT5G62070 32.775 2.08e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01462 - - gmx:100783694 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02257 10 50123751 50128638 Gma20g01462 20 41745716 41751180 GST