Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01457 ATGGAGGAGGGAAGTTTCGATTGCATCGACAACGAGAGGGATCTCATCTGCATCCTAGCGCACGTGGACCACGGGAAGACCACCCTCATCGACCACCTCATCGCCGCCGCGGGCGACGGCGTCGTCCACCCGAAGCTCGCCGGTCGCGTCCGCTTCATGGAATACCTGGACGAGGAGCAGCACCGCGCCATCACGATGAAGAGCTCCTCCATCCTCCTCCGCTACGCGGTGAACCTCATCGACTCCCCCGACCACATCGACTTCTGCAGCGAGGTCTCCATCGCCGCTCGACTCAGCGACGGCGCCCTCCTCCTCGTCGACGGCGTCGAAGGCGTCCACATCCAGACCCACGCCGTCCTTCGCCAGTGCTGGATCGAGCGCCTCATcccctgcctcgtccttaacaaacttgaccgcttaatcacctaa 429 0.5781 MEEGSFDCIDNERDLICILAHVDHGKTTLIDHLIAAAGDGVVHPKLAGRVRFMEYLDEEQHRAITMKSSSILLRYAVNLIDSPDHIDFCSEVSIAARLSDGALLLVDGVEGVHIQTHAVLRQCWIERLIPCLVLNKLDRLIT 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01457 142 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 11 142 IPR000795 GO:0003924|GO:0005525
Gma20g01457 142 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 16 142 - -
Gma20g01457 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 141 IPR027417 -
Gma20g01457 142 Pfam Elongation factor Tu GTP binding domain 16 140 IPR000795 GO:0003924|GO:0005525
Gma20g01457 142 PRINTS GTP-binding elongation factor signature 15 28 IPR000795 GO:0003924|GO:0005525
Gma20g01457 142 PRINTS GTP-binding elongation factor signature 78 88 IPR000795 GO:0003924|GO:0005525
Gma20g01457 142 PRINTS GTP-binding elongation factor signature 94 105 IPR000795 GO:0003924|GO:0005525
Gma20g01457 142 PRINTS GTP-binding elongation factor signature 130 139 IPR000795 GO:0003924|GO:0005525
Gma20g01457 142 Gene3D - 8 142 IPR027417 -
Gma20g01457 142 PANTHER ELONGATION FACTOR-LIKE GTPASE 1 16 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01457 Gma-Chr20 41706628 41707056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01457 16 141 Eukaryotic Initiation Factors Gene Family AT3G22980 79.845 2.37e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01457 K14536 - gmx:100793676 255.373