Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01451 ATGGATGGCAACCCTTTTGGAAACGTGCCACCCCCTCCAATACAAGTCCCTGATAACTTGGCTATCTCTTCCTCGTCTTCGCCAACTCCTACGACGTCGTCTCCGTCTCCGACACCCTCCGGAGGCGTCCGGTACCGCGggacgcggtaccggagcggaaagtgggtgtcggagataagggagccacgtaaaacgaagcgcatttggctggggacttacccgacagccgaaatggctgcggcggcttatgatgtcgcggccctcgcgttgaagggtcccgacacgccccttaacttccccaattcgatactctcgtacccgattcctgcgtcattgtccgccacggatattcgcgccgcggccgcggccgccgcGCAGGCTAGGATCGTGAGGGCGCCGCAGGAGTGTGGGGAAACGGTAAACCCTGATGATGGCGGGGGGCAAGGGATGTCGGAGAGGCGTGAGGAGTACATTGATGAGGATGAGTTGTTGAACATGCCGAATTTGCTCGATGATATGGCCAGGGGAATGCAGGTTAGTCCCCTTAGGATCACTTCCTATTCTTCAGATGATTCGCCTGGGAATTCTGATGGAGATAACCTTTGGAGTTATACCCTTTGA 621 0.3366 MDGNPFGNVPPPPIQVPDNLAISSSSSPTPTTSSPSPTPSGGVRYRGTRYRSGKWVSEIREPRKTKRIWLGTYPTAEMAAAAYDVAALALKGPDTPLNFPNSILSYPIPASLSATDIRAAAAAAAQARIVRAPQECGETVNPDDGGGQGMSERREEYIDEDELLNMPNLLDDMARGMQVSPLRITSYSSDDSPGNSDGDNLWSYTL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01451 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 31 204 - -
Gma20g01451 206 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Gma20g01451 206 MobiDBLite consensus disorder prediction 1 47 - -
Gma20g01451 206 CDD AP2 44 102 IPR001471 GO:0003700|GO:0006355
Gma20g01451 206 SMART rav1_2 44 106 IPR001471 GO:0003700|GO:0006355
Gma20g01451 206 Pfam AP2 domain 44 92 IPR001471 GO:0003700|GO:0006355
Gma20g01451 206 MobiDBLite consensus disorder prediction 18 41 - -
Gma20g01451 206 MobiDBLite consensus disorder prediction 1 17 - -
Gma20g01451 206 Gene3D AP2/ERF domain 42 102 IPR036955 GO:0003700|GO:0006355
Gma20g01451 206 MobiDBLite consensus disorder prediction 184 206 - -
Gma20g01451 206 ProSiteProfiles AP2/ERF domain profile. 44 100 IPR001471 GO:0003700|GO:0006355
Gma20g01451 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 31 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01451 Gma-Chr20 41644698 41646250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01451 45 204 AP2-EREBP Transcription Factor Family AT5G52020 53.631 5.52e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma20g01451 AP2 1.8e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01451 - - gmx:100776717 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01451 20 41644698 41646250 Gma20g01451 20 41644698 41646250 ECH