Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01442 ATGGAAGCGAATCCCACCCACGACGGGGATGACACCTCGGAGACGCCACCGCCGCCCATGGTGGACCCGTCCCCATCTCCGCCGCCTCAAATGAAAGAAGAGGTGATGGACGCGGAGCAAGGCGGTGACACATCTCTTCCGATGACCGttgttccggcgcatttgccggtgtcgaaggcggcggcgaagaggccgtcgaaggatcggcacacgaaggtggagggtcgtggccggagaatcaggatgccggcgacatgcgcggcgaggatcttccagctgacgcgggaactgggacacaagtccgacggGGAAACAATCCGGTGGTTGCTGGAGCACGCTGAGCCGGCAATCATCGAGGCCACCGGCACCGGCACCATCCCGGCGATCGCGGTCTCGGTCGGCGGCACCCTCAAGATTCCGACATCCTCGGCAGCAAGACCCGAGGGAGAAGTTGACACTCCGAAAAAGCGAAGGAGGAGAGCATCAAACAGCGAATTCATCGACGTGAACGAAAACCAGGTTTCTGTCTCTTCAGGGCTGGCACCAATCGCGCAAAGCGCGTATGGAAGTGGTGTTGGTGGTGGACTTGTTCCTCTGTGGCATGGTAACGCTGCTGCTTCGGGGCCTTTCTTCATGTTTCCGAACGCTTCAAACCCGCCTCAGTATTGGGCCATTCCGGCGACAGCGGCCCCGTTTTTCAACGTCCAGGCCCGGCCCATTTCGGGGTTCGTTTCCGCCTTGCAGATGCAGCATGACAACCACCACTCTTTAAACGGTGCAGCCTCGGATTCCGTTAACTCTTCTTCCACTGTGGGTTCTACTATGAGCACGGTGACTGTTACTACCAGTTCTGGCTCTGGTTCTGCTTCTGGTTCTTCCGCTGCTACAACCACTCAAATGCTCAGGGATTTCTCTTTGGAAATTTATGACAAGAAAGAGCTTCAATTTTTGGGTCAACCACCACCCTCTTCAAAGCCTTGA 981 0.4689 MEANPTHDGDDTSETPPPPMVDPSPSPPPQMKEEVMDAEQGGDTSLPMTVVPAHLPVSKAAAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSAARPEGEVDTPKKRRRRASNSEFIDVNENQVSVSSGLAPIAQSAYGSGVGGGLVPLWHGNAAASGPFFMFPNASNPPQYWAIPATAAPFFNVQARPISGFVSALQMQHDNHHSLNGAASDSVNSSSTVGSTMSTVTVTTSSGSGSASGSSAATTTQMLRDFSLEIYDKKELQFLGQPPPSSKP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01442 326 MobiDBLite consensus disorder prediction 149 163 - -
Gma20g01442 326 Pfam TCP family transcription factor 66 152 IPR017887 -
Gma20g01442 326 ProSiteProfiles TCP domain profile. 66 120 IPR017887 -
Gma20g01442 326 MobiDBLite consensus disorder prediction 255 295 - -
Gma20g01442 326 MobiDBLite consensus disorder prediction 61 76 - -
Gma20g01442 326 MobiDBLite consensus disorder prediction 1 76 - -
Gma20g01442 326 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 33 322 - -
Gma20g01442 326 MobiDBLite consensus disorder prediction 16 30 - -
Gma20g01442 326 MobiDBLite consensus disorder prediction 140 163 - -
Gma20g01442 326 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 322 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01442 Gma-Chr20 41581527 41582835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01442 20 317 TCP Transcription Factor Family AT5G51910 51.456 2.87e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma20g01442 TCP 6.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01442 - - gmx:100819475 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02273 10 50323744 50325376 Gma20g01442 20 41581527 41582835 GST