Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01439 ATGGGCAAGGAGTGGCATCGGGATGGAAGGTCCTCCAAGAGAGGTGGAGGTGCTCAAACAGAAATCCCTTCCGGTTGCATGTGTGCAATGTTTCAGGTATTTGATTTTCATCCTTTTCACTTTTCCATTGACCAGCAACAATCTTCTTTCAAGTCTCGCACCCCAGAAGACCACACTGTCCCCAAAGGAGTTGAAGCACCAAGGAGTAGCTTGGAGTCAGAAACTGGTACTACAGTGTCATCAATCTCAAAAGAGGAAAATTTTAAAATACCAAAGAACATTCGAATCAAAACAAGAGGGAGCACAAGATCAAGAACAGAAAGTTTTAGTGATTTTTCCTCAGAAATCGGTGCCTCTCCAGGGACCAAGACACCAACTTTGGTTGCAAGATTGATGGGTCTTGATCTTCTTCCCGATGCACATTCCTCTTCTTCCCCATGCCTTTCCACTCCAAACCTTCACAAACCACAGCAACACATCAAAATAATCAAACATAGAAACAGCACTGGCAGTAACGCCTTGCCTGAGACTCCTAGAATGTCCTCTGCAAGAAGATCAGATGTTGAGCATAGACAATCTCTCCAAATCAACAAGGAGAACAACACAGTCCCCTATGAGGATTCTGAGTCTCCTCGGTTTTCATTTTCAAAGAGGAAATATGATGAGAACAATTTCAGGAGTCCAAGCCACTATGCCAGGCAAATTGTGAAACAGATTAAAGAAAGTGTGAGCAGGAAGGTTGGACTAGACATCACCAACACTGTCAAGAACAGAGAACAAGGAAGAGAAGAATCTGTAGGCCAATTCAAATTCAAGAAAAAATCTAAAACTTCAGTGAATGAATCCAGCCCTGTAAAACACTCAAACTCATCTTACTCCCCAAGGCTCAACAGATTCATTGATACCAAACACAAACCAAGCACTACAACACAatcaccaactactccaaaaaatcaaaacatacacatactaaaaccaccatcaacaactactccaaaaaatctaaacacgcactcagtactaaaaccaccatcaccTCCTCCTGTTGTCAACATTGAAACACAGCTTTCAAGAGTTTCTACAAAGCCAAAGCCTCAAGCATCGCCTGAGAAAGAGGTGCATAACCAAAAATCAGTAACAAAAGGCAAGAACACTGGCAGTGGAAAGTTGAGTTCCCGGGTCAACAAGCCTCCACAGACATCAATCAGAAACAAGCAAGAAGAGTCATTTATTACTCGTCCTCCATCAGCCACTAAAGCAAATGACATCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAAGCAATCTTCTTAATAACCTCAACACGGTTCCAAATCTTCTCCCTGTCAAGACAGGACCTTCTCCTCAAAAACAGTCACAGCCGCAGGTACGTGATGATGATGCTCGAGATGAAAGACGCAGCGCACAGTTATTTAGTAGTTCGCGCCCGACGTACAAACAAGAAGCGCCACGATCACACCCACCCCGAGGAGCAACCACCAGCAGCGATGACGACAAACTTCACGGCACCTCCGCCACCACCACCGGCGCAGACGACGACGAAGGACCAGAATATCAGTACATTACAAGCATTCTAACTCGTAGTACCACCACTGGACCCCACAACAGCAACAGCGCTACAGCACTAATACCCCACCTCCAGTTTCAGTGGTTCTCTCCGACACACCCCTTGGACCCTTCCGTTTTTCACTGTCTCGAGCACTACCCAACATCCAATTCCTTTGTTTCCTTCCCCGGCGACAACAAAGATTGCATCTTTCAGCGGAAACAGCATCTGGGTCCGCGCTGCAACCGTAGATTGCTGTTCGATTTGGTCGACGAGTTGCTGTCGGAGATTCTGGTTCGGCCGAGGCGTTACAGAGAGGCGTTGTTGGAGACGACGGTGTGGGAGAGGGTTCGGAGATTCCCACGTGCGAAGTGTGAGGTTTTGGAGGATATTGATGCGTTGATTGAGATGGAGGAGATGAGGGAGGAAGAGAAAGAGGAAGTGGAAGGGTTGGTGAAAGAGATTGAAAGGAGCATGTTTGAGATGTTGGTGGATGAAACGTTTACCGTTATGGTTGGTGGCGTGGATAAATACGTAGAGGACGACGTCGTTTGA 2124 0.4402 MGKEWHRDGRSSKRGGGAQTEIPSGCMCAMFQVFDFHPFHFSIDQQQSSFKSRTPEDHTVPKGVEAPRSSLESETGTTVSSISKEENFKIPKNIRIKTRGSTRSRTESFSDFSSEIGASPGTKTPTLVARLMGLDLLPDAHSSSSPCLSTPNLHKPQQHIKIIKHRNSTGSNALPETPRMSSARRSDVEHRQSLQINKENNTVPYEDSESPRFSFSKRKYDENNFRSPSHYARQIVKQIKESVSRKVGLDITNTVKNREQGREESVGQFKFKKKSKTSVNESSPVKHSNSSYSPRLNRFIDTKHKPSTTTQSPTTPKNQNIHILKPPSTTTPKNLNTHSVLKPPSPPPVVNIETQLSRVSTKPKPQASPEKEVHNQKSVTKGKNTGSGKLSSRVNKPPQTSIRNKQEESFITRPPSATKANDIKTKSKRTHPLSSNLLNNLNTVPNLLPVKTGPSPQKQSQPQVRDDDARDERRSAQLFSSSRPTYKQEAPRSHPPRGATTSSDDDKLHGTSATTTGADDDEGPEYQYITSILTRSTTTGPHNSNSATALIPHLQFQWFSPTHPLDPSVFHCLEHYPTSNSFVSFPGDNKDCIFQRKQHLGPRCNRRLLFDLVDELLSEILVRPRRYREALLETTVWERVRRFPRAKCEVLEDIDALIEMEEMREEEKEEVEGLVKEIERSMFEMLVDETFTVMVGGVDKYVEDDVV 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01439 707 PANTHER DUF4378 DOMAIN PROTEIN 1 704 - -
Gma20g01439 707 MobiDBLite consensus disorder prediction 463 477 - -
Gma20g01439 707 MobiDBLite consensus disorder prediction 103 121 - -
Gma20g01439 707 Pfam Domain of unknown function (DUF4378) 525 689 IPR025486 -
Gma20g01439 707 MobiDBLite consensus disorder prediction 379 421 - -
Gma20g01439 707 Pfam DUF761-associated sequence motif 113 143 IPR032795 -
Gma20g01439 707 MobiDBLite consensus disorder prediction 195 209 - -
Gma20g01439 707 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 704 - -
Gma20g01439 707 MobiDBLite consensus disorder prediction 258 525 - -
Gma20g01439 707 MobiDBLite consensus disorder prediction 281 340 - -
Gma20g01439 707 MobiDBLite consensus disorder prediction 430 462 - -
Gma20g01439 707 MobiDBLite consensus disorder prediction 168 222 - -
Gma20g01439 707 MobiDBLite consensus disorder prediction 47 83 - -
Gma20g01439 707 MobiDBLite consensus disorder prediction 99 123 - -
Gma20g01439 707 Coils Coil 657 684 - -
Gma20g01439 707 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01439 Gma-Chr20 41537435 41541678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01439 94 692 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.128 1.26e-52 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01439 - - gmx:102662912 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02277 10 50355971 50359265 Gma20g01439 20 41537435 41541678 GST
Gma16g01637 16 37307523 37310850 Gma20g01439 20 41537435 41541678 PCT
Gma09g01425 09 38455551 38460325 Gma20g01439 20 41537435 41541678 PCT
Gma20g01439 20 41537435 41541678 Gma16g01637 16 37307523 37310850 PCT
Gma20g01439 20 41537435 41541678 Gma09g01425 09 38455551 38460325 PCT