Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01432 ATGCAGTTTAAATGTTTCAGTTGTTTTCTTTGTGAAAAAGAGCAATCAGAAATACAGAATGCCAACAACAAGAAAAATAGGGACTATCCATGGGAAATATACACCTTGAAGGAGTTGCTTCGTGCAACAAACAATTTTCATCAAGATAACAAGATAGGAGAGGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGGCTAATATATATTGAATGGAACTTGCAGATAGCAGTGAAGCGCTTGAAGACTATGACAGCAAAGGCAGAGATGGAGTTTGCAGTTGAAGTGGAAGTATTAGGAAGAGTGAGGCATAAGAATTTGTTAGGCTTGCGTGGATTCTATGCTGGAGGCGATGAAAGGTTGATTGTCTATGATTACATGCCTAATCACAGCTTGCTCACCCATTTGCATGGTCAACTTGCCACGGATTGTTTGCTAGATTGGCCTAGAAGAATGACCATAGCAATTGGAGCTGCAGAAGGCTTAGGGTATTTGCACCATGAAGCAAATCCTCACATCATTCATAGAGACATAAAGGCAAGCAATGTTCTCTTAGGCACTGAATTTGAAGCCAAGGTTGCTGATTTTGGTTTTGCTAAGTTGATACCAGAGGGTGTAAGCCATCTCACAACAAGGGTTAAAGGCACCCTTGGATATTTGGCGCCAGAGTATGCTATGTGGGGGAAGGTTTCTGGGAGCTGTGATGTTTACAGTTTTGGGATTTTGCTTTTGGAGATTTTGAGTGCTAAGAAACCAATTGAGAAACTCCCTGGCGGAGTGAAAAGGGACATAGTTCAATGGGTCACACCACATGTCCAAAAGGGTAACTTCCTTCATATTGCTGATCCAAAGTTGAAGGGGCATTTTGATTTAGAGCAATTGAAATCTGTGGTCATGATAGCTATGAGGTGCACAGATAATAGCCCAGAGAAGAGGCCTAGCATGGCAGAGGTGGTGGAGTGGCTCAAGGGTGGCATGGGGAGAAGAAAAAAAGAGATTCCATATTTGAGTTACAAGACTGGAGATGACAAATAA 1035 0.4213 MQFKCFSCFLCEKEQSEIQNANNKKNRDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTRLIYIEWNLQIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNHSLLTHLHGQLATDCLLDWPRRMTIAIGAAEGLGYLHHEANPHIIHRDIKASNVLLGTEFEAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSGSCDVYSFGILLLEILSAKKPIEKLPGGVKRDIVQWVTPHVQKGNFLHIADPKLKGHFDLEQLKSVVMIAMRCTDNSPEKRPSMAEVVEWLKGGMGRRKKEIPYLSYKTGDDK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01432 344 PIRSF ILK 14 326 - -
Gma20g01432 344 ProSiteProfiles Protein kinase domain profile. 46 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01432 344 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 339 - -
Gma20g01432 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Gma20g01432 344 Gene3D Phosphorylase Kinase; domain 1 8 126 - -
Gma20g01432 344 Pfam Protein tyrosine and serine/threonine kinase 47 321 IPR001245 GO:0004672|GO:0006468
Gma20g01432 344 Gene3D Transferase(Phosphotransferase) domain 1 127 333 - -
Gma20g01432 344 PANTHER OS01G0253100 PROTEIN 5 339 IPR045271 GO:0004714|GO:0006468
Gma20g01432 344 SMART serkin_6 46 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01432 344 SUPERFAMILY Protein kinase-like (PK-like) 27 327 IPR011009 -
Gma20g01432 344 ProSitePatterns Protein kinases ATP-binding region signature. 52 79 IPR017441 GO:0005524
Gma20g01432 344 CDD STKc_IRAK 52 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01432 Gma-Chr20 41438173 41439829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01432 27 324 Receptor kinase-like Gene Family AT5G45780 43.750 3.79e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gma20g01432 PK_Tyr_Ser-Thr 3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01432 - - gmx:100815397 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02283 10 50429500 50431505 Gma20g01432 20 41438173 41439829 GST
Gma16g01645 16 37433194 37435624 Gma20g01432 20 41438173 41439829 PCT
Gma09g01437 09 38671448 38673558 Gma20g01432 20 41438173 41439829 PCT
Gma20g01432 20 41438173 41439829 Gma16g01645 16 37433194 37435624 PCT
Gma20g01432 20 41438173 41439829 Gma09g01437 09 38671448 38673558 PCT