Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01431 ATGAAGTTGTCTAATTTGAGACCTGTTGGTTCTGAGAGTGGAAGATTTAGTATTACCCATTTTCCAATATGTGTCATTGTTCATCCTTGTCCAGGAGATGTTCAGATTGAGTGCAGTTATAGCTTCGGGAAATATGCGTGTCCTTTGTCAAGAGTGTTAGACATAGTGCTTAAAGAAGGGCTTGATGTGGTAAACTGTACTTCCACCAGAACAGATGACAGGTTCATACACACTACCCGATCAGAGGTTCTGCATACGTTGACTGCGAATAATTACACTGAACTGCAAAGAAAGCTTGTTAAGGCAATATCATCTTCAAGTTCGGAGGAGAGACTTTCTGAAACTGAAAACTGCTGA 357 0.4062 MKLSNLRPVGSESGRFSITHFPICVIVHPCPGDVQIECSYSFGKYACPLSRVLDIVLKEGLDVVNCTSTRTDDRFIHTTRSEVLHTLTANNYTELQRKLVKAISSSSSEERLSETENC 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01431 118 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 111 IPR015660 GO:0003700|GO:0006357
Gma20g01431 118 PANTHER TRANSCRIPTION FACTOR 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01431 Gma-Chr20 41428053 41428616 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01431 10 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 33.684 1.78e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01431 - K04253 gmx:100803786 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02284 10 50440229 50441741 Gma20g01431 20 41428053 41428616 GST
Gma16g01646 16 37443602 37444974 Gma20g01431 20 41428053 41428616 PCT
Gma09g01438 09 38702737 38704494 Gma20g01431 20 41428053 41428616 PCT
Gma20g01431 20 41428053 41428616 Gma16g01646 16 37443602 37444974 PCT
Gma20g01431 20 41428053 41428616 Gma09g01438 09 38702737 38704494 PCT