Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01429 ATGTTTCCTTTACAACGCGGCAATGAGCTGGTAATCCAGTTTTCTAATGGTCACCACCCGCAGCACAAAATCTCCCAAGATCTGATTCTGGATGATCAAGATATCGATCAATCTCCCCTTGTCGGTTATTCCGATAAAAAATTGCGTACTAGCCGTCCAAAAAAACTATTTTATCATGAGGCTGATACCTGCCACGCTAATTCTAACCAAGAATATACAAAAAAGATGGTTCATAGAGAGATTGAAAAGCAAAGGAGGCAAGAAATGGCTACCCTTCATGCCTCTCTTAGATCCCTTCTCCCTCTTGACTTCATCAAGGGAAAGCGTTCGATATCTGATCAAATGAACGAGGCAGTGAATTACATAAATCACCTTCAGAAGAATATTAAAGAATTGAGTGACAAGAGGGATAAGCTTAAGAAGAAACCCTCCATAATTAATTCCAGCCCTGAAGACCATGAGAATTACAAGCATGCATCTAGCGGTTTCACTGTCCACCAGAATAGTGGTGGAGCTGTGGGGATTGAAATCAGTGGATTCAGTGAGGAAGAGGTTCCACTTTCAAAATTGCTTGAACTGGTGTTTGAAGAGGGACTTGAAGTTGTTAATTGTCTTTCAACCAAAGTCAATGGCAGATTACTCCACAGTTTGCAGTGTGAGGTTGACAATTCCGGCAGTGTAGATCTATCTGAGCTGAGAAGGAAATTTTCCGATGTCATTCCATCACTTCGTTGTTCTGCGTAA 744 0.414 MFPLQRGNELVIQFSNGHHPQHKISQDLILDDQDIDQSPLVGYSDKKLRTSRPKKLFYHEADTCHANSNQEYTKKMVHREIEKQRRQEMATLHASLRSLLPLDFIKGKRSISDQMNEAVNYINHLQKNIKELSDKRDKLKKKPSIINSSPEDHENYKHASSGFTVHQNSGGAVGIEISGFSEEEVPLSKLLELVFEEGLEVVNCLSTKVNGRLLHSLQCEVDNSGSVDLSELRRKFSDVIPSLRCSA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01429 247 MobiDBLite consensus disorder prediction 134 156 - -
Gma20g01429 247 Pfam Helix-loop-helix DNA-binding domain 74 126 IPR011598 GO:0046983
Gma20g01429 247 Coils Coil 115 142 - -
Gma20g01429 247 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 245 IPR015660 GO:0003700|GO:0006357
Gma20g01429 247 CDD bHLH_AtORG2_like 74 144 - -
Gma20g01429 247 SMART finulus 79 131 IPR011598 GO:0046983
Gma20g01429 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 144 IPR036638 GO:0046983
Gma20g01429 247 Gene3D - 64 153 IPR036638 GO:0046983
Gma20g01429 247 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 245 - -
Gma20g01429 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 125 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01429 Gma-Chr20 41399347 41406000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01429 63 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 45.902 6.83e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma20g01429 HLH 2.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01429 - - gmx:100775836 478.789