LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma20g01426	ATGTTTACGAGTCCAATCACTCCAATGGAAAAGATGGCTCTCATTCTAGCGAGCTATCTCGTCTTGAGTACACTCTTTTCTGCAAATGCTGAGTTTGTCAAGAAGACTTACATCATTCAAATGGATAAGTCAGCAAAGCCTGACACCTTCACCAATCACCTTAATTGGTATTCATCAAAAGTGAAATCAATTTTGTCAAATTCAGTAGAAGCTGAGATGGACCAGGAAGAGAGAATCATTTATACTTACCAAACTGCTTTTCATGGACTGGCTGCCATGTTGAGCCAAGAAGAAGCTGAGAAGCTAGAGGCAGAAGAAGGTGTTGTGGCCATATTCCCTGATACAAAGTACCAACTACACACCACAAGAAGTCCAACTTTCCTTGGACTTGAACCAACACAAAGCACCAACAACATGTGGTCATTAAAGCTAGCCAACCATGATGTCATAGTGGGAGTGCTAGACACTGGGGTTTGGCCTGAGAGTGAGAGCTTCAATGACACAGGCATGAGACCAGTACCTTCTCACTGGAAAGGCGCCTGTGAGACTGGTAGAGGCTTCAGAAAACATCACTGCAACAAGAAGATTGTGGGGGCAAGAATGTTCTACCATGGATATGAAGCAGCAACGGGTAAAATTGATGAGCAAGCAGAATACAAATCACCAAGAGACCAAGATGGTCATGGCACTCACACTGCAGCTACAGTTGCTGGCTCTCCAGTGCATGGTGCTAATTTTCTAGGCTATGCTTATGGCACAGCAAGAGGAATGGCACCAGGAGCAAGAATTGCAGCATACAAAGTATGTTGGACTGGTGGATGCTTCAGCTCAGATATTCTGTCAGCTGTTGATAGAGCTGTGGCTGATGGAGTTGATGTTCTATCCATCTCTTTGGGTGGTGGAGTCTCCTCTTACTACCGTGATAGTTTATCTGTAGCTGCATTTGGAGCAATGGAGAAAGGTGTTTTTGTTTCATGTTCTGCTGGAAATGCAGGACCTGACCCTGTGAGCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGAGATTTTCCTGCAGATGTTAGGCTTGGAAATGGAAGAAAGATAACCGGAACCTCACTCTACAAAGGAAGAAGCATGCTCTCAGTTAAGAAACAATACCCTTTAGTATACATGGGAAATACTAATTCAAGCATCCCTGATCCAAAATCTTTGTGCTTGGAAGGTACTTTGGATCGTAGAATGGTTTCAGGCAAGATTGTTATTTGTGACAGAGGCATTAGTCCAAGAGTGCAGAAGGGTCAAGTGGTGAAAAATGCAGGAGGGGCGGGAATGATTCTCACAAACACTGCAGCCAATGGAGAGGAGCTGGTTGCTGATTGTCACCTCCTTCCAGCAGTTGCAATTGGAGAAAAGGAAGGAAAAGAGCTCAAACGTTATGTGTTAACAAGTAAAAAAGCCACTGCAACTCTAGGTTTTCAGGCTACAAGGTTGGGGGTTAGACCATCTCCTGTAGTGGCAGCATTTTCATCAAGAGGGCCAAATTTTCTCACCCTTGAAATTCTGAAGCCTGATGTGGTGGCTCCTGGGGTGAACATTCTTGCTGCTTGGAGTGAGGCCATTGGTCCATCAAGTTTGCCAACAGATCACAGAAGGGTGAAGTTCAACATACTCTCAGGAACTTCAATGTCATGCCCTCATGTGAGTGGCATTGCTGCTTTGCTCAAGGCTAGGCATCCAGATTGGAGTCCCGCTGCCATAAAATCTGCTTTGATGACCACAGCTTATGTTCATGACAATACCATCAAGCCTCTCAGAGATGCCTCAAATGCTGAAGCCTCAACTCCTTATGATCATGGTGCCGGACACATCAACCCTAGAAGAGCTCTTGACCCAGGTTTGGTCTATGATATTCAGCCACAGGACTACTTTGAATTCCTGTGCACACAGAAGCTTACTACATCTGAGCTTGGAGTTTTTGCCAAGTATTCAAACAGAACTTGCAAGCACTCTCTTTCAAGTCCAGGGGACTTGAACTATCCAGCCATATCTGTAGTTTTTCCACTGAAAAATTCCACTTCAGTTTTGACTGTTCACAGAACTGCCACCAATGTTGGTCTTCCAGTTTCCAAGTACCATGTTGTGGTTTCACCTTTTAAAGGTGCTTCTGTTAAAGTTGAGCCAGACACCTTGAGTTTTACAAGAAAATACCAGAAACTATCTTACAAAATTACCTTAACAACACAATCTCGCCAAACAGAACCTGAATTTGGAGGTCTGGTGTGGAAGGATGGTGTGCACAAGGTAAGAAGTCCAATTGTTATAACGTATCTGCCACCAATATGA	2346	0.4429	MFTSPITPMEKMALILASYLVLSTLFSANAEFVKKTYIIQMDKSAKPDTFTNHLNWYSSKVKSILSNSVEAEMDQEERIIYTYQTAFHGLAAMLSQEEAEKLEAEEGVVAIFPDTKYQLHTTRSPTFLGLEPTQSTNNMWSLKLANHDVIVGVLDTGVWPESESFNDTGMRPVPSHWKGACETGRGFRKHHCNKKIVGARMFYHGYEAATGKIDEQAEYKSPRDQDGHGTHTAATVAGSPVHGANFLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDRAVADGVDVLSISLGGGVSSYYRDSLSVAAFGAMEKGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPADVRLGNGRKITGTSLYKGRSMLSVKKQYPLVYMGNTNSSIPDPKSLCLEGTLDRRMVSGKIVICDRGISPRVQKGQVVKNAGGAGMILTNTAANGEELVADCHLLPAVAIGEKEGKELKRYVLTSKKATATLGFQATRLGVRPSPVVAAFSSRGPNFLTLEILKPDVVAPGVNILAAWSEAIGPSSLPTDHRRVKFNILSGTSMSCPHVSGIAALLKARHPDWSPAAIKSALMTTAYVHDNTIKPLRDASNAEASTPYDHGAGHINPRRALDPGLVYDIQPQDYFEFLCTQKLTTSELGVFAKYSNRTCKHSLSSPGDLNYPAISVVFPLKNSTSVLTVHRTATNVGLPVSKYHVVVSPFKGASVKVEPDTLSFTRKYQKLSYKITLTTQSRQTEPEFGGLVWKDGVHKVRSPIVITYLPPI	781

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma20g01426	781	Pfam	PA domain	386	477	IPR003137	-
	Gma20g01426	781	Gene3D	-	354	499	-	-
	Gma20g01426	781	PRINTS	Subtilisin serine protease family (S8) signature	146	165	IPR015500	-
	Gma20g01426	781	PRINTS	Subtilisin serine protease family (S8) signature	224	237	IPR015500	-
	Gma20g01426	781	PRINTS	Subtilisin serine protease family (S8) signature	559	575	IPR015500	-
	Gma20g01426	781	CDD	Peptidases_S8_3	117	596	IPR034197	-
	Gma20g01426	781	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	120	IPR037045	-
	Gma20g01426	781	PANTHER	XYLEM SERINE PROTEINASE 1	26	775	-	-
	Gma20g01426	781	Gene3D	-	647	778	-	-
	Gma20g01426	781	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	26	775	IPR045051	-
	Gma20g01426	781	SUPERFAMILY	Protease propeptides/inhibitors	35	118	-	-
	Gma20g01426	781	ProSiteProfiles	Serine proteases, subtilase domain profile.	116	630	-	-
	Gma20g01426	781	ProSitePatterns	Serine proteases, subtilase family, serine active site.	560	570	IPR023828	-
	Gma20g01426	781	Gene3D	Peptidase S8/S53 domain	148	643	IPR036852	GO:0004252\|GO:0006508
	Gma20g01426	781	Pfam	Peptidase inhibitor I9	36	120	IPR010259	-
	Gma20g01426	781	CDD	PA_subtilisin_like	360	491	-	-
	Gma20g01426	781	Pfam	Subtilase family	148	600	IPR000209	GO:0006508\|GO:0008236
	Gma20g01426	781	SUPERFAMILY	Subtilisin-like	119	634	IPR036852	GO:0004252\|GO:0006508
	Gma20g01426	781	Pfam	Fibronectin type-III domain	677	775	IPR041469	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma20g01426	Gma-Chr20	41383208	41385553	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma20g01426	8	781	Subtilisin-like Serine Gene Family	AT5G51750	70.528	0.0	1140

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma20g01426	-		-	gmx:102661592	1555.04

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma10g02287	10	50473610	50475958	Gma20g01426	20	41383208	41385553	GST
	Gma16g01650	16	37486053	37488398	Gma20g01426	20	41383208	41385553	PCT
	Gma09g01442	09	38760312	38762657	Gma20g01426	20	41383208	41385553	PCT
	Gma20g01426	20	41383208	41385553	Gma16g01650	16	37486053	37488398	PCT
	Gma20g01426	20	41383208	41385553	Gma09g01442	09	38760312	38762657	PCT