Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01414 ATGCAACTTGTTCACTCCGACGAACCCGCGCCAGAGCGCCGCGACTGGCCGGAGAAACCCGAAGATCCTAAAGCCGACAACGATTCTCTCGACTCCGGAACCGACGACGGCGCCGCTCTCGACGTCACCGGAAAAAGCGTCGAGTTTCCGGCGGCGGAGAACGCCGAGGACTCCGCGGAGTGCCTTTACGTGTACAAGAACGTTTACAGCTTGATTCCGAAGTCGGTTTCGCGGCTCGCCCGGTTGCGAACGCTGAAGTTCTTCGGAAACGAGATTAACCTTTTTGCGCCGGAATTTGGGAACTTGACGACGTTAGAGTGCTTGCAGATGAAGATTTCCTCGCCGGGGATTGGAGGCTTGCCGTTGCACACGCTCAAGGGTTTGAAGGAACTCGAACTCTCCAAAGGACCTCCTAGACCCTCGGCTTTTCCGATTCTGACCGAGATTTCGGGTCTCAAGTGTTTGACCAAGCTTTCCATTTGCCATTTCTCTATTCGATACCTTCCACCGGAAATTGGATGCTTAAAGAAACTGGAGTATCTTGATCTTTCGTTCAATAAAATGAAGACTTTGCCGGCGGAGATTACTTATTTGAAAGGCTTGATATCGATGAAGGTTGCGAATAATAAGTTGGTGGAACTGCCGGCAGCGATGTCTTCTCTGTCAAGGTTGGAGAGTTTAGACCTGTCGAATAATAGGTTGACTTCGTTAGGGTCCCTTGAACTTGCCTCAATGCATAGACTTCAAGAGTTAAATCTTCAGTACAACAAGCTGCTCAGAATTTTCCAAATTCCTTCATGGATGTGTTGTAATATGGAGGGAAATGATGAAGCTAGATACAAAGATGATTGCAGTTCTTCTGTTGAAATGGATCTTTACGAAAGCAACTTTCAGGAAAATGATGAAACCCTTTCTGATGGCCCTCATAATACCTCATCAAGCATGTTAACAAGCCCCTCATCTAGCAGCAGATGTTTTGCTTCCCGGAAGTCAGGCAAACGGTGGAAAAGGCGGTATTATTTACAGCAGAAAGCTCGTCAAGAACGTTTGAACAACAGTAGGAAGTGGAAAGCTGTAGATCATGATGACCTATTGTTGAGCAAGAAGATTCACAGAATTTCTGAATCAGGAAATCATGATAGTCTTGCTTCTGAAAGTTGTGCAGAAATTGAATCAGAGAATGGGAGCCTGGATGATAATAATAAAAGAATATTCTCTGAACGAGCAGTAAATGACAATGCAATTGATAATGATAACAATGATGAAGTAATTACTGAAAAACAGTTTTCTGGAGAAGATTGCTGCACTACTGAAAGCAAAGATGAAAAAGATGCATCCTTATGCTCCTTAGAGAAGAGGCAAAGTGAACAGGAAGAAGCATCTTGTTTAGAACTTTTGGAGAGTGTTTCTAAATCAAAGAGACATTTAGATCGTGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAGTCAATTAGTTCTAGTTCATTATTGTCTTGCAAATACAGCAAGATCTCATTTTGTGGCACTGAAGACCATTTATCAGATGGCTTTTATGATGCAGGACGAGATCGGCCGTTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTCATCCTTTTGGACAGAAAAAGGGATGAAGAGTTGGATGCTGTTATGCTAGCTGCCCAGGCATTGGTTTATAATTTGAAGAAGTTAAATGGTTTAAACAGACATGGAAACCAGGTCGGGGTTGATAACTTGCAGACGGCATCATTGCTTGCACTCTTTGTATCAGATCATTTTGGTGGCAGTGATAGAAGTGCTATTGTAGAACGGACACGGAAATCTGTGTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGCTCAGCTGGAAGCAGTACCAGTATAAGTTCTCCCACTGAACCAGTTGCAAACACCATAGAAGATATCACTCTTTCAAAGATGTCAGAAAAATCTCTTGACTCTATGAAAAAAAGGCAAAATTCAATCATAATTCCAATTGGCTCTGTGCAGTATGGTGTATGTAGACATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAGCCACCAGTTCCTTGTGAGCTTGTCAGGGGTTACCTAGATTTTTCACCACATGCCTGGAATATCATTCTGATTAAGAGGGGTGCTACATGGGTTCGAATGTTGATTGATGCTTGTCAACCTCTTGATATAAGAGAAGAGAAAGATCCTGAATATTTTTGCAGGTACATACCTCTTAATCGAACCACAATTCCTCTATCAACTATAGGATGTCCAGGTCCTGATTATTCTTTTCCATCTCTCACTACATGTGATGAACTTGAGACAAAGGCTTCGACTAGTTTAGTTAAATGCAAATTCGGATCAGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGAGCAGGGGAGTTCGGCAGACAAAATTAAAAACTTCAAATATAATTGTTTGGGAGAAATTAGAATTCTTGGTGCTTTAAAACACCCCTGCATAGTGGAAATGTATGGACACCAAATTTCATGTCAATGGTCTGTCTCAGCTGATGGTAATCCTGAACACCGTGTATTAAGATCTGCAATTTTTATGGAGTATGTGGAAGGGGGCTCCCTAAAAAGCTATCTGGAGAAGCTGTCAGAAGCTGGTGAAAAGCATGTTCCTGTGGAGTTGGCTTTGCTTATTGCCAAAGATGTCTCTTGTGCATTGTCAGAGCTGCACTCTAGGCACATAATTCATCGTGACATAAAAAGTGAAAACATACTGTTTGATTTGGATAGGAAGAGAGATGATGGAACTCCCACTGTGAAGCTCTGTGATTTTGATAGTGCAGTGCCACTAAGATCAACTTTACATGCGTGCTGTATTGCTCATGCGGGAACACCTCCTCCCTGTGTATGTGTTGGAACACCTCGGTGGATGGCTCCAGAGGTCATGCGGACTATGTATAAAAAAAACTCCTATGGATTGGAAGCTGACATTTGGTCGTTTGGATGTTTACTTTTGGAGATGCTGACTCTGGAAATTCCATATTCTGGACTTTCAGATTCACACTTCCTTGATAGTCTGCAGATGGGTAAACGACCAGAATTAACTGATGAGCTGAAAGTATTGAGTTCAATGAATGAACCCACCATGATTGCATCTGGTGAAGAACTGGAAAAATCAGATGCTGAGGTAGACATGTTGAAATTCCTTGTTGATTTGTTTTATAAGTGCGTGGAAGAAAATCCAAGCAAACGTCCTACAGCTGAAGAAATCCATAAAATGCTGCTTGCACACACAGGTCACTTACAAGTTTAA 3330 0.4231 MQLVHSDEPAPERRDWPEKPEDPKADNDSLDSGTDDGAALDVTGKSVEFPAAENAEDSAECLYVYKNVYSLIPKSVSRLARLRTLKFFGNEINLFAPEFGNLTTLECLQMKISSPGIGGLPLHTLKGLKELELSKGPPRPSAFPILTEISGLKCLTKLSICHFSIRYLPPEIGCLKKLEYLDLSFNKMKTLPAEITYLKGLISMKVANNKLVELPAAMSSLSRLESLDLSNNRLTSLGSLELASMHRLQELNLQYNKLLRIFQIPSWMCCNMEGNDEARYKDDCSSSVEMDLYESNFQENDETLSDGPHNTSSSMLTSPSSSSRCFASRKSGKRWKRRYYLQQKARQERLNNSRKWKAVDHDDLLLSKKIHRISESGNHDSLASESCAEIESENGSLDDNNKRIFSERAVNDNAIDNDNNDEVITEKQFSGEDCCTTESKDEKDASLCSLEKRQSEQEEASCLELLESVSKSKRHLDRDLDNPKPCKSRKSISSSSLLSCKYSKISFCGTEDHLSDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRKRDEELDAVMLAAQALVYNLKKLNGLNRHGNQVGVDNLQTASLLALFVSDHFGGSDRSAIVERTRKSVSGSNYNKPFVCTCSAGSSTSISSPTEPVANTIEDITLSKMSEKSLDSMKKRQNSIIIPIGSVQYGVCRHRALLFKYLCDHMEPPVPCELVRGYLDFSPHAWNIILIKRGATWVRMLIDACQPLDIREEKDPEYFCRYIPLNRTTIPLSTIGCPGPDYSFPSLTTCDELETKASTSLVKCKFGSVEAAAKVRTLEEQGSSADKIKNFKYNCLGEIRILGALKHPCIVEMYGHQISCQWSVSADGNPEHRVLRSAIFMEYVEGGSLKSYLEKLSEAGEKHVPVELALLIAKDVSCALSELHSRHIIHRDIKSENILFDLDRKRDDGTPTVKLCDFDSAVPLRSTLHACCIAHAGTPPPCVCVGTPRWMAPEVMRTMYKKNSYGLEADIWSFGCLLLEMLTLEIPYSGLSDSHFLDSLQMGKRPELTDELKVLSSMNEPTMIASGEELEKSDAEVDMLKFLVDLFYKCVEENPSKRPTAEEIHKMLLAHTGHLQV 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01414 1109 Pfam Leucine rich repeat 203 258 IPR001611 GO:0005515
Gma20g01414 1109 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 60 1104 - -
Gma20g01414 1109 PRINTS Leucine-rich repeat signature 178 191 - -
Gma20g01414 1109 PRINTS Leucine-rich repeat signature 221 234 - -
Gma20g01414 1109 SUPERFAMILY Protein kinase-like (PK-like) 795 1100 IPR011009 -
Gma20g01414 1109 SUPERFAMILY RNI-like 63 263 - -
Gma20g01414 1109 SUPERFAMILY Cysteine proteinases 680 737 IPR038765 -
Gma20g01414 1109 Pfam Ethylene-responsive protein kinase Le-CTR1 653 725 - -
Gma20g01414 1109 MobiDBLite consensus disorder prediction 377 399 - -
Gma20g01414 1109 Gene3D Transferase(Phosphotransferase) domain 1 780 1107 - -
Gma20g01414 1109 Gene3D Ribonuclease Inhibitor 48 287 IPR032675 -
Gma20g01414 1109 Pfam Protein kinase domain 818 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01414 1109 MobiDBLite consensus disorder prediction 300 328 - -
Gma20g01414 1109 SMART serkin_6 779 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01414 1109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 920 932 IPR008271 GO:0004672|GO:0006468
Gma20g01414 1109 PANTHER BNAC08G43810D PROTEIN 60 1104 - -
Gma20g01414 1109 MobiDBLite consensus disorder prediction 1 31 - -
Gma20g01414 1109 SMART LRR_bac_2 198 217 - -
Gma20g01414 1109 SMART LRR_bac_2 221 240 - -
Gma20g01414 1109 SMART LRR_bac_2 175 194 - -
Gma20g01414 1109 ProSiteProfiles Leucine-rich repeat profile. 177 198 IPR001611 GO:0005515
Gma20g01414 1109 MobiDBLite consensus disorder prediction 379 394 - -
Gma20g01414 1109 SMART LRR_sd22_2 175 203 - -
Gma20g01414 1109 SMART LRR_sd22_2 221 242 - -
Gma20g01414 1109 SMART LRR_typ_2 221 244 IPR003591 -
Gma20g01414 1109 SMART LRR_typ_2 245 271 IPR003591 -
Gma20g01414 1109 SMART LRR_typ_2 175 198 IPR003591 -
Gma20g01414 1109 SMART LRR_typ_2 79 101 IPR003591 -
Gma20g01414 1109 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Gma20g01414 1109 MobiDBLite consensus disorder prediction 300 329 - -
Gma20g01414 1109 ProSiteProfiles Protein kinase domain profile. 787 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01414 1109 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01414 Gma-Chr20 41225160 41233068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01414 793 1096 MAP Kinase Kinase Kinase AT4G08500 31.111 1.32e-22 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Gma20g01414 Pkinase 8.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01414 - - gmx:100811118 2161.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02299 10 50613682 50621618 Gma20g01414 20 41225160 41233068 GST