Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01410 ATGGAGGAAGAAGAGAGTCAGTGCTTCGAGTGCCTCCAACTTCGAATAAAGTCCGATTTCTCGGAGCAAGTGTTTTTCAATTATGCCATTTCCACTTCTGCTTTTCCTTTCGGATCCTCAGCTATCGTTAATATTTCTGGTACAGCTGATGGCGAATCTTCGGGTGCTCAATTTATATTGCAGTACATGCCGACTCGTGATAAGAATTGTTTTATCAATTATGTAAATGAATATATTTTGGATAGTGGTGAAATCACTACTAGGAGTAGTGATCCTGGTATTGGAAGCAGTGAAGATAATAATGCTGTTAATGTTAGAATTACTTCATCAGATGATTCTGAGAGTGGAAAAGCTTTTTCTGGAAGCACGAGTTGTAGTCATTCTGGAAGATTTTCTTGCTTGAGGACAATCACTTCACTTGCGCCGATTGCTCGTGTGGGAATGTCTTCCTATTCCACATTTCAAGAGGTCTCCACTGATTTCTTGTGTGAGTTAATCGAAGATCACGTGTTAGAGTCGCTTGATCTCTTCATTGAAGGGAAAGCGTCTGGACGGGACAGTGTAAATTTCCTTAGTTTAATTGGGTTGCCATCATTTGAAGAGGATCCTTTTCCAGGCTCTTTGAGGCATCCAAACATAGCTCCTGTCCTTGCAATTTTTAAAACATCCGATCACGTTAATGTTGTGCTTCCAAAGACTCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCAACGCATTAAAGTCTAATTGGAATATAATATTTCTTATGTATCAGCTACTCTCAGCCTTATCGTACATACATGGTTTAGGGCTTTCTCATGGTAATATATGCCCGTCCAATATCATGTTGACTGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCCGTATTGGAATCTAATTTAACTTTGCAAGAGAGTGAAAGAGATAACTCCAAACCTGCAAGAATTGGTTGTTGTAATGTGGCTTGTCGTTCTTATGACCTTTATGCTGATCTAAAGCTTTCTCCAACAATAGATTGGCAATCTTGTTTTCATAAATGGTGGAGAGGAGAATTAAGTAATTTTGAATATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCTCAAAACCTGATGACAGTTGTGACGCAGGGTGGCGAGACTTGAGCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAATTGGATTTCACCTATTCAACGTCTGAAATCCCTCATCATGTTTCAGATGAATGTTTGTCTGAATTGGCTGTCTGTAGTTATAAAGCAAGAAGACTCCCTTTGAGTGTTCTCCGAATGGCTGTTCGTTCAGTGTATGAGCCTAATGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCTGATGAGTGCATTCCAGAGTTCTACTGTCATGCCCAAATTTTTAAGTCAATACATGATGGAATGGCTGATTTGGCTGTACCCTCTTGGGCAGAGAGTCCTGAGGATTTCATTAAATTACATCGTGATGCATTAGAAAGTAATAGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGTTACAAAATGTCTGGCCAGGCAGCTATTGCTGCTAAGAATGTTATGCTTCCTATATCAGAACCCATGATGCCAAGATCAACAGGACGTCGTCAGCTCTTTACACAACCACACCCCATCCGTCATGCCACTACCAGAACAAAACGTCATGGTTCCAATAAATATGCCAAAGTTTGGATTCAAGCAAATGAAATGCACCAAGAGACATCTCTTCTATCTGAAACTGCTTATCTACAAGAACTAGAGCAAGCATCTACATTTTCTGAACAGGCTAGGCATTTGAATGCCTATTACCATTATCCCTTAAATCAAACAACAGGGAAAAACATCTCATCTTTGGGAGATCCAACAACAGAGACATTTAGTGAAAGTATAAGCAAACTATCTTTGATTGACAGAAATTACCAGGTGCCGTATAGAATGAACCTAATATCTTTTCTTCAACATATGAAAGAGGAAGATGAAAGCTCCTTAGGATATCCAGACTTGCTACTTTGGAAGCAGAAATTATCTTCTTCAAGACTTTGCTCTGAAGATGTTGCTAGGGACATATTTTCTATTGGTTGTCTCTTGGCTGAACTTCATCTTTGCAGGCCGCTCTTTGATCCAATCTCATTGGCAATATACTTGGAAGATGGAACCTTACCAGGATTTCTGCAGGATCTACCTCCTGATATTAGATTACTTGTTGAAGCATGCATCCAAAAGGATTGGACGAGGAGGCCATCTGCCAAAATTCTTCTGGAATCTCCTTATTTTCCAAAGACTGTCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTAGCTAAAGATGAAACTCGTCTTCATTATGCTGCAAATCTTGCAAAGCATGGAGCTCTGAGGGAAATGGGTGCATTTGCGACTGAAATGTGCACTACTTATTGCTTACCACTTATAGTGAATGCTGTGAGTGATACTGAAGCTGAATGGGCATATATGCTACTGAAGGAATTTATGAAATGCCTAACAGTTCAAGCAATGAAAACATTAATCTTGCCTACCATACAGAAAATTTTACAGGCTAGTTGCAAACTTGATTTTACCACAGGTTATTTACGTTTAAAGGTTTCTCTTCTGCAAGATTCATTTGTACGGGAAATATGGAATCGAGTTGGTAAACAAGCATACCTGGAAACTATTCATCCATTGGTCTTGTCAAACTTGTACAATTCTCCAGATAAAAGTTCAGCTGCCTCTGCTTCAGTTCTTCTAATCAGTTCTAGTGAAGAACTTGGTGTACCTATTACCATCCATCAGACTATCTTGCCTCTTGTTCACTGCTTTGGGAAGGGACTATGTGCGGATGGCATTGATGTGCTGGTCAGAATTGGTGGCATTTTTGGGGAATTGTTTATCATTAAACAGATGGTACCTTTACTGAAAAATGTTGTCCGTTCCTTCATTGATGTGTCATGCATGAATAAGGCCGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGCATGATGACTTTAGATGGCCTTGTATATTTCTTGACAGAAGAGGTCATTGTAAAGGAGCTGCTTGAAGACCTATGTTGCATACACATTGGAGTTCTTATGCAGAAACATATGGAAATTGCAGTGCTTCAGGTGGCTGCTTCTACTCTTTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACAGCATTGCATATTCTTCCAAAACTGAAAGAACTATTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCAACTACTGTGGGCAGAAACTTGAAGGTTGGCAAAATAAAAATTGGAGGAGACTTGCATATTGAAAGTCGTATGGATCTAGTGTTGGTTCTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGATTCTTGAACAACATCTTCTACGCCATCATAATTGGAAGTGGGAATATGCTGGAGAATCATCAAAAAACAGCTCAGAAAATTTTCTTGCTAGAAGACCTGTAATAGCCCAGGGATTTACATCTGAATACAATCCTGCAAAGCTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGAAGTGCCAAAAATTTGATCCCTCAAAGACGACCATTTAAAGTTCATCAAAGTCCAGTAGCAGTGCATGAAGGAATGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGAATTTCTTGGGAGGGTGGGGGTTCAGAAAGACGAACTTCCATGGAAGATCAGAGCATCTGTTATATACTCTATACGTGCACATCATGGAGCAGTGAGGTCTCTGGCTGTTAACCAAGATGAATGTACTGTTTTTACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTCAGAAATGGGAATTGAGCCGAACTAACTGTCTGTCCGGCTACCATGGCCATGAGGAGGTTGTGAATGATATTTACATCTTATCATCTAGTGGAAGAGTGGCTTCTTGTGATGGAACAATTCACATTTGGAATAGTCAAACAGGGAAGCAGATATTAGTATTTGCTGAGTCCCAAACAGAATCTGGCCATCCTACAAGCCATCCATCCTCTGCATCAAAAATTAACAGTGACCAGGCAAATGTGCTTAATATGAATACACTATCCAATGGAATATTGTCTAGTGCTTTTGACTCAAGCCTTTATACTTGTATGCATCTATTAAACTCCACTGAAACTCTTGTAGTTGGAACTGGAAATGGTTCTCTGAGGTTCATTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGAGGCGAATCTACTGTATCTAGTTTTCCTTCACTTATTTCTGCCATTTGTTCCACTGGCTCTGACAAGATGCAAGCAGGTGGAATTTCCACTTTGCCATCTTTTATTGCAGCTGGACTAAGTTCTGGTCACTGTAAATTATTTGATGCAAAGAGTGGAAATGTAATTTCCTCTTGGCGAGCTCATGATGGATATGTGACAAAGTTGGCAGCACCTGAGGAACATCTACTTGTTTCCAGCTCTCTGGACAGAACTTTACGAGTCTGGGACTTAAGAATGAATCTGCCATTGCAGCCCATTATTTTCAGAGGTCATTCAGATGGCATATCCAGTTTCTCCGTTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGAATCGGGCTTCTCTCCTTGTCTAAATCTGCCAATGAAACAGATGGGCAGCATCACATTAGCCCCCAGAAACTATATATTTCTGATAATGGTCAGAGAAGCTTGTCAGCGTTATCAAGTATTAGTATACTTCCATTCTCTCGATTGTTTCTCATTGGAACCGAAGATGGTTATCTGAGAATCTGTTGTTAA 5001 0.4031 MEEEESQCFECLQLRIKSDFSEQVFFNYAISTSAFPFGSSAIVNISGTADGESSGAQFILQYMPTRDKNCFINYVNEYILDSGEITTRSSDPGIGSSEDNNAVNVRITSSDDSESGKAFSGSTSCSHSGRFSCLRTITSLAPIARVGMSSYSTFQEVSTDFLCELIEDHVLESLDLFIEGKASGRDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIFKTSDHVNVVLPKTPYNLESILHFNPNALKSNWNIIFLMYQLLSALSYIHGLGLSHGNICPSNIMLTDSLWSWLRLWNEPVLESNLTLQESERDNSKPARIGCCNVACRSYDLYADLKLSPTIDWQSCFHKWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDSCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCHAQIFKSIHDGMADLAVPSWAESPEDFIKLHRDALESNRVSFQLHHWIDITFGYKMSGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIRHATTRTKRHGSNKYAKVWIQANEMHQETSLLSETAYLQELEQASTFSEQARHLNAYYHYPLNQTTGKNISSLGDPTTETFSESISKLSLIDRNYQVPYRMNLISFLQHMKEEDESSLGYPDLLLWKQKLSSSRLCSEDVARDIFSIGCLLAELHLCRPLFDPISLAIYLEDGTLPGFLQDLPPDIRLLVEACIQKDWTRRPSAKILLESPYFPKTVKSSYLFLAPLQLVAKDETRLHYAANLAKHGALREMGAFATEMCTTYCLPLIVNAVSDTEAEWAYMLLKEFMKCLTVQAMKTLILPTIQKILQASCKLDFTTGYLRLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYNSPDKSSAASASVLLISSSEELGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGELFIIKQMVPLLKNVVRSFIDVSCMNKADPVQSWSALALIDCMMTLDGLVYFLTEEVIVKELLEDLCCIHIGVLMQKHMEIAVLQVAASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVGKIKIGGDLHIESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQHLLRHHNWKWEYAGESSKNSSENFLARRPVIAQGFTSEYNPAKLLLNGVGWSIPQSQGRSAKNLIPQRRPFKVHQSPVAVHEGMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDELPWKIRASVIYSIRAHHGAVRSLAVNQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDIYILSSSGRVASCDGTIHIWNSQTGKQILVFAESQTESGHPTSHPSSASKINSDQANVLNMNTLSNGILSSAFDSSLYTCMHLLNSTETLVVGTGNGSLRFIDVARGQKLHIWRGESTVSSFPSLISAICSTGSDKMQAGGISTLPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEEHLLVSSSLDRTLRVWDLRMNLPLQPIIFRGHSDGISSFSVWGQDVISISRNRIGLLSLSKSANETDGQHHISPQKLYISDNGQRSLSALSSISILPFSRLFLIGTEDGYLRICC 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01410 1666 ProSiteProfiles BEACH domain profile. 336 608 IPR000409 -
Gma20g01410 1666 SUPERFAMILY Protein kinase-like (PK-like) 718 814 IPR011009 -
Gma20g01410 1666 SMART WD40_4 1530 1568 IPR001680 GO:0005515
Gma20g01410 1666 SMART WD40_4 1303 1346 IPR001680 GO:0005515
Gma20g01410 1666 SMART WD40_4 1631 1666 IPR001680 GO:0005515
Gma20g01410 1666 SMART WD40_4 1431 1468 IPR001680 GO:0005515
Gma20g01410 1666 SMART WD40_4 1349 1386 IPR001680 GO:0005515
Gma20g01410 1666 Pfam Beige/BEACH domain 350 560 IPR000409 -
Gma20g01410 1666 SUPERFAMILY BEACH domain 334 580 IPR036372 -
Gma20g01410 1666 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1537 1570 - -
Gma20g01410 1666 Pfam WD domain, G-beta repeat 1532 1568 IPR001680 GO:0005515
Gma20g01410 1666 Pfam WD domain, G-beta repeat 1351 1386 IPR001680 GO:0005515
Gma20g01410 1666 Gene3D BEACH domain 340 580 IPR036372 -
Gma20g01410 1666 Gene3D - 1281 1495 IPR015943 GO:0005515
Gma20g01410 1666 Gene3D Transferase(Phosphotransferase) domain 1 706 800 - -
Gma20g01410 1666 ProSiteProfiles Trp-Asp (WD) repeats profile. 1537 1570 IPR001680 GO:0005515
Gma20g01410 1666 CDD Beach 350 580 IPR000409 -
Gma20g01410 1666 SMART Beach_2 348 580 IPR000409 -
Gma20g01410 1666 CDD PKc 207 288 - -
Gma20g01410 1666 ProSitePatterns Trp-Asp (WD) repeats signature. 1555 1569 IPR019775 -
Gma20g01410 1666 Gene3D - 1496 1666 IPR015943 GO:0005515
Gma20g01410 1666 PANTHER GH12955P 3 1666 - -
Gma20g01410 1666 SUPERFAMILY WD40 repeat-like 1306 1664 IPR036322 GO:0005515
Gma20g01410 1666 Pfam Protein kinase domain 207 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01410 1666 Gene3D Transferase(Phosphotransferase) domain 1 205 324 - -
Gma20g01410 1666 SUPERFAMILY Protein kinase-like (PK-like) 207 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01410 Gma-Chr20 41187249 41197208 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Gma20g01410 Beach 1e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01410 K17601 - gmx:100810047 3332.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02302 10 50653053 50662596 Gma20g01410 20 41187249 41197208 GST