Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01399 ATGGCTGGTAGGTTGCCTGGTGTTGGGTTGCTTGCAAGGAAGAGAACAGAGCAGAACCATAGATATGAACACCAACACCATGCCACATGCCGACAATCCTATCACCTTGGAGAATCATCATTGGAACCACCATGGATACCACTCACTGTCTTAGATGAAACTGCTCTCAAGGCCAGACAAAGGCTTCACAAGAAGCTTGGACACTTCTTTTCCTCATACAGGTCAAGTGAGAATCCAAGAAAAGAAGGAAAAGTAAACCAAAGCAGCTACGAGAAGAAGGATGGAGGAATAGGTCGGAAGTTGTTAGAGAGTTCATGGTTGTTGCGTGGCAACAAGTTTAAGAAAGATAGAAAAGTGTGTGCTGTGTGCCTAGAAGATTTGGGGCAAGAGCAACAGGTTATGAACCTTTCATGCTCCCATAAGTACCATTCAGCATGCCTTCTTCCCTGGCTTGCAGCCCATCCCCATTGCCCTTATTGTCGAACCCCAGTTCAGCCCTGA 501 0.4651 MAGRLPGVGLLARKRTEQNHRYEHQHHATCRQSYHLGESSLEPPWIPLTVLDETALKARQRLHKKLGHFFSSYRSSENPRKEGKVNQSSYEKKDGGIGRKLLESSWLLRGNKFKKDRKVCAVCLEDLGQEQQVMNLSCSHKYHSACLLPWLAAHPHCPYCRTPVQP 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01399 166 ProSiteProfiles Zinc finger RING-type profile. 120 161 IPR001841 -
Gma20g01399 166 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 41 163 - -
Gma20g01399 166 SMART ring_2 120 160 IPR001841 -
Gma20g01399 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 166 IPR013083 -
Gma20g01399 166 SUPERFAMILY RING/U-box 119 165 - -
Gma20g01399 166 MobiDBLite consensus disorder prediction 75 94 - -
Gma20g01399 166 MobiDBLite consensus disorder prediction 73 94 - -
Gma20g01399 166 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 41 163 - -
Gma20g01399 166 CDD RING-H2_PA-TM-RING 119 161 - -
Gma20g01399 166 Pfam Ring finger domain 119 161 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01399 Gma-Chr20 41060124 41062728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01399 114 161 C3H Transcription Factor Family AT3G58720 43.750 1.77e-10 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02316 10 50788136 50789896 Gma20g01399 20 41060124 41062728 GST