Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01398 ATGGGGAAGACAGGCAAATGGCTTAGAAACTTGTTGACAACAGGTAAGAAAGACAAGGAAAAGGAGAAATCTACAATCAAGCTGAATTCTTCTTCAAATGGAACAGAAAACTCAACCACTCCAACTTCCTCAACCCCAAAGGAGAAAAAGAGATGGAGTTTTAGAAGATCATCAGCCTCAGCCACTGCCACTACTGCCACAACCACACCAACAACAACTTCCAAGGAATTGAATTTTGTAGAAACAAATGTGACTGCTTCACAGACAGTGCAAACTGACACTGATATTCAGAATGAGCAGAGGAAGCATGTCATGgctgtggctgcagccactgcagcagcagctgatgctgcagtggcagctgctcaggctgtagctgcTGTGATCCGTTTGACTTCTACTTCCAATGCAACATCCAAAAGTATTGAAGAGGCTGCTGCCATTAAAATCCAATCTGCCTTTCGCTCTCACTTGGCAAAAAAAGCATTGTGTGCTCTAAGAGGATTAGTGAAGTTGCAGGCACTAGTAAGGGGTCACTTGGTGAGAAAACAGGCCAAGGCAACACTGAGATGCATGCAGGCTTTGGTGACAGCACAAGCCAGAGCTCGTGCTCAGAGGATCCAAATGGGGTCAGAAGGAAAGGCCAATCAAAAGCACAGAAATGCTGCCGAAGATGATTTGCTCAGGCATATATATAATGAAATGGACAGAGGCTTGGAAGACAACATCAAGATTGTAGAGATGGATGTTTGTGAATCAAAAGTTAACTCCAGAAGCAGCAGTGTGTATCATCATGGACATCAAGAACAATATGACAATAGATTTTCCACACATTATTCAACAAATGGTTCCTACACAAAAGAAGAAAAGTACAAGGTATCACCGGCTCCATCAGCATTGACAGAGTCGAGTCCAAGAGCCTGCAGTGGTCATTTTGATGACTGTTTCAGCACAGCACAAAGCAGCCCTCACCCTCAGTTCTACTCTGCAGTGTCAAGATCAGAAGATTCAAAGCACCCTTTTGCTTTCCATAGGCCAGCTTATGCAGAATCCATGTCCTATGACTACCCTTTGTTTCCAAATTACATGGCTAACACCGAATCATCAAGGGCTAAAGTCAGGTCACACAGTGCACCAAAACAAAGACCGGATTCATTCGAGAGGCAACCAAGCCGGCGAAGAGCTTCAGTTGAGGGAAGAAATGTCCCAAGGCCAATGAGGATGCAGAGATCATCTTCACATGTGGGTGCCACTGTCCATAACTACCATTATCCTTGGTCAATAAAGCTCGATAGATCCGCAGTTTCACTCAAAGATAGTGAGTGTGGCTCTACAAGTACAGTGCTCACTAACACTAATTATTGCAGATCTCTTGTTGCATATGGCTCACGTGGAGATGGGTACTGA 1407 0.4179 MGKTGKWLRNLLTTGKKDKEKEKSTIKLNSSSNGTENSTTPTSSTPKEKKRWSFRRSSASATATTATTTPTTTSKELNFVETNVTASQTVQTDTDIQNEQRKHVMAVAAATAAAADAAVAAAQAVAAVIRLTSTSNATSKSIEEAAAIKIQSAFRSHLAKKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRIQMGSEGKANQKHRNAAEDDLLRHIYNEMDRGLEDNIKIVEMDVCESKVNSRSSSVYHHGHQEQYDNRFSTHYSTNGSYTKEEKYKVSPAPSALTESSPRACSGHFDDCFSTAQSSPHPQFYSAVSRSEDSKHPFAFHRPAYAESMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRASVEGRNVPRPMRMQRSSSHVGATVHNYHYPWSIKLDRSAVSLKDSECGSTSTVLTNTNYCRSLVAYGSRGDGY 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01398 468 MobiDBLite consensus disorder prediction 1 72 - -
Gma20g01398 468 MobiDBLite consensus disorder prediction 56 72 - -
Gma20g01398 468 MobiDBLite consensus disorder prediction 27 47 - -
Gma20g01398 468 PANTHER IQ-DOMAIN 5-RELATED 1 445 - -
Gma20g01398 468 SMART iq_5 165 186 IPR000048 GO:0005515
Gma20g01398 468 SMART iq_5 142 164 IPR000048 GO:0005515
Gma20g01398 468 Gene3D - 141 195 - -
Gma20g01398 468 MobiDBLite consensus disorder prediction 12 26 - -
Gma20g01398 468 ProSiteProfiles IQ motif profile. 167 194 IPR000048 GO:0005515
Gma20g01398 468 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 445 - -
Gma20g01398 468 ProSiteProfiles IQ motif profile. 143 171 IPR000048 GO:0005515
Gma20g01398 468 MobiDBLite consensus disorder prediction 370 414 - -
Gma20g01398 468 Pfam Protein of unknown function (DUF4005) 340 399 IPR025064 -
Gma20g01398 468 Pfam IQ calmodulin-binding motif 145 163 IPR000048 GO:0005515
Gma20g01398 468 Pfam IQ calmodulin-binding motif 170 186 IPR000048 GO:0005515
Gma20g01398 468 MobiDBLite consensus disorder prediction 373 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01398 Gma-Chr20 41047796 41049738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01398 1 456 IQD Protein Family AT4G14750 44.468 1.24e-100 307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02317 10 50797434 50799845 Gma20g01398 20 41047796 41049738 GST