Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01381 ATGCCCAGCCTTTTCTCCAAACACCTCCACCTCTGTTTCTTGAAGCTCAAATACCCCACCATTCTCTGCCAACCTCACCACAGCGATCACACCCCACCACCCTCTTCTTCCGACAACTCCACAATCTTCCCCTTCACCGACACCACCACCACCACCTCCTCCGGCTCCTCCACTGAGCCAGACTTCGCCTCCATCTTCGCCTCGCAGCGCTTCTTCTTCTCCTCCCCGGGCACCTCCAACTCCATCGTCGAGTCCCCCGACACGCGCACCTTCATGATCCCCACCGGTGGCGGCGTCAGAGTCCCCAAGTACTCCCTCAACCCCTACGTTGATTTCCTCCGCTCAATGCAGGAAATGATCCGTTCTCGCCAAGTCTTGGACATCACTAAAGACTCCGAATATCTCCACGAACTTCTCCTTTGCTACCTCGCTCTCAACCCTACACACACTCACAAGTTCATCCTTCGCGCATTCACCGACCTCGTCCTCCAACTATTGTCCTCCGCCCCGTGTCTGACGCACAACCACAACCACCACCGACGCCACCGTAGTCTCTCCGGAAGGTTGCTGTAA 573 0.5672 MPSLFSKHLHLCFLKLKYPTILCQPHHSDHTPPPSSSDNSTIFPFTDTTTTTSSGSSTEPDFASIFASQRFFFSSPGTSNSIVESPDTRTFMIPTGGGVRVPKYSLNPYVDFLRSMQEMIRSRQVLDITKDSEYLHELLLCYLALNPTHTHKFILRAFTDLVLQLLSSAPCLTHNHNHHRRHRSLSGRLL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01381 190 MobiDBLite consensus disorder prediction 29 58 - -
Gma20g01381 190 Pfam Transcriptional repressor, ovate 105 165 IPR006458 -
Gma20g01381 190 MobiDBLite consensus disorder prediction 27 58 - -
Gma20g01381 190 PANTHER TRANSCRIPTION REPRESSOR OFP12 35 173 - -
Gma20g01381 190 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 35 173 IPR038933 GO:0045892
Gma20g01381 190 ProSiteProfiles OVATE domain profile. 101 164 IPR006458 -
Gma20g01381 190 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 101 167 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01381 Gma-Chr20 40846113 40847127 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma20g01381 Ovate 8.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01381 - - gmx:102666896 309.301