Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01363 ATGAATGGTGCTGCATGTGTTGAGGCAGAGTGCTGTGAGTTTGTGGAAGTTGATCCCACGGGAAGATATGGAAGATACAATGAAATTCTTGGCAAAGGAGCTTCTAAGACAGTCTATAGAGCATTTGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTAAAGTTTTATGACTTTTTGCAGAATCCTGAAGATCTTGAGAGGTTATACAGTGAAATTCATCTTCTCAAGACATTGAAACACAAGAACATCATGAAGTTGTATACTTCCTGGGTTGATACTGCCAACAGACACATTAACTTTGTCACTGAGATGTTTACCTCTGGGACTCTGAGACAGTACAGACTTAAACACAGACGGGTGAATATCAGAGCTGTTAAGCATTGGTGCAGGCAGATTTTGGAAGGGCTTCTCTATCTGCACAGCCATGATCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATTGGTGATCTGGGCCTTGCTGCAATTCTCCGCAAATCTAATGCTGCTCGCTGTGTTGGCACACCTGAGTTTATGGCTCCAGAAGTGTATGAAGAGGATTACAATGAGTTGGTTGACATATACTCTTTTGGAATGTGCATCTTAGAGATGGTCACTTTTGAATATCCTTATAGTGAATGCAACCATCCTGCTCAAATTTACAAGAAAGTTGTATCTGGGAAGAAGCCAGAAGCTCTTTACAAAGTAGACAATCCCGAGGTTAGGCAGTTTGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCTAGGGAACTCTTGGAGGACCCTTTTCTCCAAATTGATGATTATGGATTTGACTCAAAAGTTTTGCAGTATCAAAGAGATTGTTATGAAGTAACGCCATTAATTAGACAACCTGTGAATGGAATTTGTATCATTAACAACAACTTAATGAGTGGGGACACTGATAATATTGGTGGTTATGGGCCTGTATCTGAATTGGATTATCATCAAGACGATTTTGAAGCGACTGAAATTGGTCTCTTTGATTGTGAAGAGGACGACAATTTGGCTGAAGTTGACACCACAATCAAAGGTAGAAGAGAAGACGATGGCATCTTTTTGAGACTCAGAATAGCAGATAAGGAAGGTCGAATTAGAAATATCTACTTCCCATTTGACATTGAGACTGATACCGCATTGAGTGTTGCAAATGAAATGGTAGCTGAGCTCGACATAAATGACCAAGATGTAACAAATTTAGCAAGTATGATAGACAATGAAATTGCAAGATTGGTCCCAGAGTGGAAAACAGGACCCAGAATAGAGGAAAAATCAGAATGTTCAAGTGCAAGTGTCTGCCTCAATTGTGCTGCAAACGGTTCCTTGTTTGATTATGTATCATCAAATAATCCATGTGGCAAGAACCTTCAATTTCTTCATTGTTCTAAAACTGGATGTGCTGCAGTTCATGGCCGATTTGAAGAGATAACATACCAAGTTGAAGGGTCTGAAAATAGTGCTAGAGAAGGTGCACTGGATGAATCAAGCCAATCCAATGGCATTCAATATACAGATATCTGGGCTCAGAGAGATGAACCGGATTTATGCCATGAAGAGTTAAAAGAGATGCACTGTGACCAAGCTCATGAGGCATCAAACTCATCAAACATCAAGGAGGATAGAAAAACTGTTAATGTGGATGAACAAAGTGATCTCAATACCAAAAAGTCTTCTTCAAACCCTGCACCAAATTGTGTTTTCTTGGACTATGAAAATGAAATAAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTTAGAGACCAACAACTAGGGCGTAAACCAAAATTTACTAGCATATCTCCTGACCCCGAAAAATTGGAGCATTTGAAAGATGGAATTCTGAGGCTATCAGATACACCCAATTTGAAGATACAAAACAATAAACCACTATTGAGAACTATAGTTTCTGGGAAGCATTTTCATGTTGAATCTGAGAAATGCAACACTTTGGCTGATCAAATGGTTCAAAATGTTGATGAGATTTGTCAGTCTAACAGTCCTGAGCAAATGATCACAGCCAGGGATTTCTTTACAGGAGTATTGCTTCCACACTCACTTCAGAGGGCAACCTCACTTCCTGTTGATGCAGTAGATGTCTAG 2193 0.3985 MNGAACVEAECCEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKFYDFLQNPEDLERLYSEIHLLKTLKHKNIMKLYTSWVDTANRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKKPEALYKVDNPEVRQFVEKCLATVSLRLSARELLEDPFLQIDDYGFDSKVLQYQRDCYEVTPLIRQPVNGICIINNNLMSGDTDNIGGYGPVSELDYHQDDFEATEIGLFDCEEDDNLAEVDTTIKGRREDDGIFLRLRIADKEGRIRNIYFPFDIETDTALSVANEMVAELDINDQDVTNLASMIDNEIARLVPEWKTGPRIEEKSECSSASVCLNCAANGSLFDYVSSNNPCGKNLQFLHCSKTGCAAVHGRFEEITYQVEGSENSAREGALDESSQSNGIQYTDIWAQRDEPDLCHEELKEMHCDQAHEASNSSNIKEDRKTVNVDEQSDLNTKKSSSNPAPNCVFLDYENEIRQELRWLKAKYQMQLRELRDQQLGRKPKFTSISPDPEKLEHLKDGILRLSDTPNLKIQNNKPLLRTIVSGKHFHVESEKCNTLADQMVQNVDEICQSNSPEQMITARDFFTGVLLPHSLQRATSLPVDAVDV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01363 730 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01363 730 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01363 730 MobiDBLite consensus disorder prediction 551 583 - -
Gma20g01363 730 MobiDBLite consensus disorder prediction 551 573 - -
Gma20g01363 730 CDD STKc_WNK 22 281 - -
Gma20g01363 730 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 719 - -
Gma20g01363 730 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 432 IPR024678 GO:0004674|GO:0005524
Gma20g01363 730 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Gma20g01363 730 Coils Coil 599 619 - -
Gma20g01363 730 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01363 730 Gene3D - 375 461 - -
Gma20g01363 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gma20g01363 730 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 719 - -
Gma20g01363 730 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Gma20g01363 730 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01363 Gma-Chr20 40667303 40670916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01363 1 513 MAP Kinase Kinase Kinase AT3G22420 57.271 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma20g01363 Pkinase 7.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01363 K08867 - gmx:100804179 1486.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02352 10 51106768 51110363 Gma20g01363 20 40667303 40670916 GST