Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01337 ATGTTCTCTCAAAACGTGATTCTCCCTCCCGAAAACCCTAGACCCACGGCGTTCGCTTCCAAACCCATGAGCAATGAGATCGCGAAGCCTCTGCCGTCGATTCTCGTTGGCCGCTTCAAGGCTCTACTCAAGCAGCGCGACGACGAACTCCGAGTCGCCGCCGGCGACCCCGTACCGCCGGCGTCCACCGACGAAATCGTCCAGATTTACGAACTCCTCTTGTCGGAACTCACGTGCAATCTGAAACCTATCATCACCGATCTCACAATTATTGCCGAACAGCAGAGGGAGCACGCAAAAGGCATCGCTGACGCAATTTGCGCTCGGATTCTCGAGGTGCCAGTAGATCAAAAGCTTCCTTCACTCTATCTGTTGGACAGTATTGTGAAGAATTTTGGGCAGGAATACATTAGATACTTCTCTTTACGTCTTCCTGAAGTTTTCTGTGAGGCGTACAGGCAGATTCAGCCTACTTTGCATTCTGCTATGCGCCATCTTTTTGGTACTTGGTCAAAAGTCTTTCCACCTTCAGTCCTGCGCAAGATTGAAACTGAGTTGCAATTTTCTCAAGCAGTTAATACTCAATCATCAACCCTGAATCCTGTCAGGGCTTCTGAATCATCTCGACCAAGCCACGCCATACATGTTAATCCAAAATACTTGCGGCAGTTGGAGCGCTCAACTGTGGATAGTGCTAGTAAGACACATCAATTTTTATCAAGCAGTAGCAGCCTTGGAATATCCTCGTCGTCCCCTTCAAGAATTGGAGTTGATAGGCCTTTGTCTGCATCTATGGATGAATATGCAGTGGACAATTCTGCTGTCAGGTTAATTGAGAGAAACTCGCCTCATCCTGCTGTTGATTATGGAGTAGCCAAAGCATTAGGTAGAGATGTGGATTTGACTGAATGGCAGCAAAAGCAGTATCCTGGTGATGGTCGTAATCGATTTCCAACTTCTGTTACATACAGCCTTAGTAATGGACATCAGCGGCAAAGTCCAAGAGCTTTAATTGATGCATACGGCAGTGACAAAAGCCAAGAAACTTCAAGCAGTAAGCCTTTGTTAGTTGAACGTCTGGATAGAAATGGTATAGACAAAGTGTTGTCAACATCTTGGCAGAATACTGAAGAGGAGGAGTTTGACTGGGAAAATATGAGTCCAACCTTAACAGACCATAGTAGGAATAACAGTTTATTGCCTTCAACTTTTGGTTTCTCTAGGGAAAGGCCTGGTGTTGCAGCTAATGCAACTTTGTCGGAGCAAGATACTAGGAAGGGGTGGTCTAGTGGATCTCAGCTTCCTCCAGTAGATGATTCTTCTGCCATAGCAGAAGATGCATTTGCCTCTTCGACTTTTCGTCGCACACCCCCGGGTCAGGTACCTGGATCCCAAAATCAAATCAATCATAGCCTGGGCTCCTCTCAACCTCATGATGCTTGGAAGATTTCACATCATCCGTCTAACATTTTTAGTAATAGGGGGCGAGCAAGGAATCTTATGATCCCTCCTATGGACAACATTCGCAATACAGATAATAACCCGTATTGGGTTCGACCATCAATGTCGAGGATGGAAGCTCGGCCATCAGTTTTGCCAGCACCTTTTGAAATGAGGCCTTCTGTAAATGTGAATGTAACTAGACCGCCCATCATAAATCCAATAAATCCATTGCAAAAACATGTTAGGAGTCAGTTCAATGCAATAAATACTAGTAATCCTATTGCAAACCATGTAAATAAATCTTCATTTATGCCAAAACAGTCATTTGACAGTGTTGAGAACAAGGATGCAAGTATTTCAAAGATACATCAGTTGCCTAATCAGCTTCCTGGAGTAATTTCTTCAAACCAGCAAAATCATGGGCAGGCACCACAACTACAGTTTTTTCCATCTCAGGATCCATCAACCTCACAATTTTGTCATGGGAGTTCATTGCAGGGACATGGTGCTTCTATAAGTACAGCCATGTCAAATCCCTTACCAGTTATACCATTCCCTTTACCATTTCAAAGTATTGCAAATAACCCTTTACATTTACAGGGTGGAGCCCATCCATCTTTACCTCCAGGTCGCCCTCCTGCTCCATCTCAAATGATACCTCATCCAAATGTTGGTGCATATATGTCAAGCCAACAGCCAACTGTTGGATATACTAATTTAATTAGTTCTCTAATGTCGCAAGGTGTGATCTCATTGGCTAACCAGCTGCCTGCACAGGATTCTGTTGGAACTGAGTTTAATCCAGATATTCTGAAGGTTCGTCATGAGTCTGCAGTCAATGCCTTATATGGTGATCTCCCTAGACAATGCACAACTTGTGGGCTGAGATTCAAATGCCAAGAGGAACACAGTAGTCATATGGATTGGCATGTGACTAAGAATCGGATGTCTAAAACCCGTAAGCAGAAACCCTCTCGGAAGTGGTTTGTTAGTGACAGGATGTGGCTCAGTGGTGCAGAGGCATTGGGAACAGAATCAGCTCCAGGTTTTTTGCCAACAGAAACCATAGAAGAAAGGAAAGATGATGAAGAGTTGGCAGTGCCTGCAGAAGAAGACCAGAATACATGTGCATTATGCGGAGAGCCTTTTGATGAGTTTTACAGTGATGAAATGGAGGAATGGATGTATCGAGGAGCAGTATACCTCAATGCACCTACGGGAACAACAGCAGGCATGGATAGGACTCAGTTAGGCCCCATAATTCATGCTAAATGCAGATCAGAATCTAATATGGCCACCTCTGAAGATCTTGGACCAGATGAAAAGGGTGCCGATGAAGAGGGTTCCCAAAGGAAACGAATGCGAAGTTGA 2814 0.4467 MFSQNVILPPENPRPTAFASKPMSNEIAKPLPSILVGRFKALLKQRDDELRVAAGDPVPPASTDEIVQIYELLLSELTCNLKPIITDLTIIAEQQREHAKGIADAICARILEVPVDQKLPSLYLLDSIVKNFGQEYIRYFSLRLPEVFCEAYRQIQPTLHSAMRHLFGTWSKVFPPSVLRKIETELQFSQAVNTQSSTLNPVRASESSRPSHAIHVNPKYLRQLERSTVDSASKTHQFLSSSSSLGISSSSPSRIGVDRPLSASMDEYAVDNSAVRLIERNSPHPAVDYGVAKALGRDVDLTEWQQKQYPGDGRNRFPTSVTYSLSNGHQRQSPRALIDAYGSDKSQETSSSKPLLVERLDRNGIDKVLSTSWQNTEEEEFDWENMSPTLTDHSRNNSLLPSTFGFSRERPGVAANATLSEQDTRKGWSSGSQLPPVDDSSAIAEDAFASSTFRRTPPGQVPGSQNQINHSLGSSQPHDAWKISHHPSNIFSNRGRARNLMIPPMDNIRNTDNNPYWVRPSMSRMEARPSVLPAPFEMRPSVNVNVTRPPIINPINPLQKHVRSQFNAINTSNPIANHVNKSSFMPKQSFDSVENKDASISKIHQLPNQLPGVISSNQQNHGQAPQLQFFPSQDPSTSQFCHGSSLQGHGASISTAMSNPLPVIPFPLPFQSIANNPLHLQGGAHPSLPPGRPPAPSQMIPHPNVGAYMSSQQPTVGYTNLISSLMSQGVISLANQLPAQDSVGTEFNPDILKVRHESAVNALYGDLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKTRKQKPSRKWFVSDRMWLSGAEALGTESAPGFLPTETIEERKDDEELAVPAEEDQNTCALCGEPFDEFYSDEMEEWMYRGAVYLNAPTGTTAGMDRTQLGPIIHAKCRSESNMATSEDLGPDEKGADEEGSQRKRMRS 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01337 937 SUPERFAMILY ENTH/VHS domain 62 189 IPR008942 -
Gma20g01337 937 MobiDBLite consensus disorder prediction 308 333 - -
Gma20g01337 937 Gene3D - 59 188 IPR008942 -
Gma20g01337 937 ProSitePatterns Zinc finger C2H2 type domain signature. 771 791 IPR013087 -
Gma20g01337 937 MobiDBLite consensus disorder prediction 306 334 - -
Gma20g01337 937 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 29 912 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Gma20g01337 937 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 29 912 - -
Gma20g01337 937 CDD CID_Pcf11 70 187 - -
Gma20g01337 937 SMART 558neu5 65 187 IPR006569 -
Gma20g01337 937 Pfam CID domain 81 181 IPR006569 -
Gma20g01337 937 ProSiteProfiles CID domain profile. 62 190 IPR006569 -
Gma20g01337 937 MobiDBLite consensus disorder prediction 906 937 - -
Gma20g01337 937 MobiDBLite consensus disorder prediction 454 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01337 Gma-Chr20 40332079 40339292 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01337 705 937 C2H2 Transcription Factor Family AT4G04885 67.382 5.23e-103 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01337 K14400 - gmx:100794796 1871.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02377 10 51379585 51386164 Gma20g01337 20 40332079 40339292 GST