Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01315 ATGTCCTTCACTTATTTCTTCGACTCAGTGAAGAAAATTTCTCGGCATAACAGAATCATGATTACCAAGTCCAAACAGAGTCTAACTCTGTTCCTACTTTGCACCCTTTTACTCACCATAGCAGAAACCTCGGCATCAGTGTTCAACAACGTTAGCTGCACGAGCAACAAGACTTTCACTCCAAACAGCAccttcaacaccaacctcaacacccttctctcctacctttcctcaaacgtaaccaacaacgttagattcttcaacgcaaccgtagggaaagattcgaacaccgtctatggcctctacatgtgccgtggagacgtgccgtttgctctatgcagagagtgtgtgggttttgcaacacaaacaataccttcgtcatgtcccacatcaaaagaagctgtgatttggtacaacgagtgtttgttgcgctactcttacaggttcatcttctctaAAATGGAAGAGTGGCCAAGGCACAAGATCAATATTCCATTGGGGGATCCTGTGGTTTTGCATAGTAATGGATTCTACACTGCGTTAGGATCCATTTTCGATGAATTACCAAATAAAGCAGCACTGGATCTTAGTGAGTCTAATGGATATGCCGTTAAGCAAGAAAATGCTTCTGGCAGTGTAACACTGTATGGTCTCGCGCAGTGCACGCCGGACTTGGCTGCCGGAGACTGCAAACTGTGTGTTGCCGATGCGGTGGCCGAGTTTGTCAAGTCTTGTTGCGGAGGGAGCATAGGGGCGAGTGTTCTGTTTCCCAGTTGCATTGTAAGGTATGAGACGTATCCGTTTTATCAGCATTCGGGAACCTCTGCGCCAACAATGATTCAGCGTGGAAGAAATATTGGAACTGAAGTGCTTGTGATCGTTGTTGTCTTGCTTGTGGTTTTGGCGATGCTTTTTGGCTTTGGCTATTGTTTCATCCGGATAAAAGCGAGAAAGAAACGCAAGGCCAGTGACAGAGAAAACTttgggccagaactcactgtcttggagtctttggaatttgatttggctacaattgaagcagccacaaacaagttttctgaagaccgcaggataggcaaagggggttatggagaagtctacaagggaatccttcctaacggagaagaagtagctgtaaagagattatcaacaaattctaagcaaggaggggaggaattcaaaaatgaagtgttgttaatagccaaacttcaacacaaaaatttggtgagattaataggattttgccaagaagacagagagaaaatacttatctatgagtatgtgcctaacaagagtcttgaccacttcttatttgattcccaaaagcacagacaattaacttggccggagcggtttaaaatcgtaaaaggaattgcaagaggtattctttatctacatgaagattctcgtcttaagattatacaccgtgatatcaaaccaagcaatgttctattggacaatggcatcaatccaaaaatctctgattttggaatggcaaggatggtagctacagaccaaattcaaggatgcacgaatagagttgtgggcacatatggttatatgtctcctgaatatgcaatgcatggacaattttctgagaagtctgatgtattcagttttggagttatggttcttgagattattagtggcaagaagaactcttgttcttttgaatcatgtcgtgttgatgacctattgagttatgcatggaataactggagggatgaatcaccatatcaattgctggattcaactctgctagaatcttatgttccaaacgaagtggaaaaaatgagaagacattcagctgaacatgaatcatcttcagGGATGGCCTGA 1839 0.1805 MSFTYFFDSVKKISRHNRIMITKSKQSLTLFLLCTLLLTIAETSASVFNNVSCTSNKTFTPNSTFNTNLNTLLSYLSSNVTNNVRFFNATVGKDSNTVYGLYMCRGDVPFALCRECVGFATQTIPSSCPTSKEAVIWYNECLLRYSYRFIFSKMEEWPRHKINIPLGDPVVLHSNGFYTALGSIFDELPNKAALDLSESNGYAVKQENASGSVTLYGLAQCTPDLAAGDCKLCVADAVAEFVKSCCGGSIGASVLFPSCIVRYETYPFYQHSGTSAPTMIQRGRNIGTEVLVIVVVLLVVLAMLFGFGYCFIRIKARKKRKASDRENFGPELTVLESLEFDLATIEAATNKFSEDRRIGKGGYGEVYKGILPNGEEVAVKRLSTNSKQGGEEFKNEVLLIAKLQHKNLVRLIGFCQEDREKILIYEYVPNKSLDHFLFDSQKHRQLTWPERFKIVKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNGINPKISDFGMARMVATDQIQGCTNRVVGTYGYMSPEYAMHGQFSEKSDVFSFGVMVLEIISGKKNSCSFESCRVDDLLSYAWNNWRDESPYQLLDSTLLESYVPNEVEKMRRHSAEHESSSGMA 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01315 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Gma20g01315 612 ProSiteProfiles Protein kinase domain profile. 352 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01315 612 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 26 598 - -
Gma20g01315 612 Gene3D - 46 149 IPR038408 -
Gma20g01315 612 Gene3D - 170 268 IPR038408 -
Gma20g01315 612 ProSiteProfiles Gnk2-homologous domain profile. 158 268 IPR002902 -
Gma20g01315 612 Gene3D Phosphorylase Kinase; domain 1 312 427 - -
Gma20g01315 612 SUPERFAMILY Protein kinase-like (PK-like) 331 597 IPR011009 -
Gma20g01315 612 Gene3D Transferase(Phosphotransferase) domain 1 428 604 - -
Gma20g01315 612 Pfam Protein kinase domain 353 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01315 612 ProSiteProfiles Gnk2-homologous domain profile. 47 150 IPR002902 -
Gma20g01315 612 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 598 - -
Gma20g01315 612 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Gma20g01315 612 SMART serkin_6 352 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01315 612 Pfam Salt stress response/antifungal 53 146 IPR002902 -
Gma20g01315 612 Pfam Salt stress response/antifungal 176 266 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01315 Gma-Chr20 40139768 40147160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01315 25 595 Receptor kinase-like Gene Family AT4G05200 45.286 6.42e-175 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma20g01315 Pkinase 6.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01315 - - gmx:100791642 1130.93