Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01306 atgcaactcactcaggttttcaatcacttggagattgaaaagaagcgaacagatgacctagaccatgtgaggaaagctaggcagaggcaattttggtgggagagtcctattgaTGAGCTTGGATTGAATGAGTTGCTGCAGTTAAAGGCCTCTATTGAGGAGCTAAAAAAGAACATAGAAAAACATGCTAGCAAATTCATGATTGAACACTCTAGTAATATACCTTCTTCATCAATTCTTGGACCTAATAATGGACTTGGTCCACTTGTACGTTATGACACCTTTGAGAACAAACCTGGTGCTGAGATTGGTATTGCTTCATCAATTCCAAATGCCCATTATCTCGCTTTTCGCACTGGGTATCTTTGA 369 0.2683 MQLTQVFNHLEIEKKRTDDLDHVRKARQRQFWWESPIDELGLNELLQLKASIEELKKNIEKHASKFMIEHSSNIPSSSILGPNNGLGPLVRYDTFENKPGAEIGIASSIPNAHYLAFRTGYL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01306 122 PANTHER MADS BOX PROTEIN 2 75 - -
Gma20g01306 122 Coils Coil 42 65 - -
Gma20g01306 122 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL62 2 75 - -
Gma20g01306 122 Gene3D - 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01306 Gma-Chr20 39788810 39789178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01306 3 76 Type I MADS-box Gene Family AT5G60440 41.333 5.33e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01306 - - gmx:100793705 229.18