Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01263 ATGGGTGATGCACTAAATGAAGTGCAGCACATGGGTGGTGCACCTGCTGCTTCTCCCAAGAGGGACATTACATTGCTTGAGGGAGACAAAGATTTTGAGCTGCACAATGGCATTGAATTTGAATCCCATGAAGCAGCATATTCATTTTATCAGGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAACAGCAGACGCTCAAAGAAAACAAAAGAATTTATTGATGCCAAGTTTGCATGCTCTAGGTATGGAGTTACACCTGAGTCTGACAGTGGCAGCAGTCGAAGACCTAGTGTAAAGAAAACAGATTGCAAAGCTTGCATGCATGTGAAGAGAAAGCCAGATGGAAAGTGGATCATTCATGAGTTTATAAAGGAACATAATCATGAACTTGTACCAGCTCTGGCATATCATTTTCGGATTCATAGAAATATGAAATTAGCTGAAAAGAATAATATTGATATCTTGCATGCTGTTAGTGAACGAACCAGAAAGATGTATGTTGAAATGTCTAGGCAATCTAGCAGCTGTCAAAACATTGGGTCTTTCTTGGGTGACATAAACTATCAGTTTGACAGAGGCCAGTATTTGGCTttggatgagggagatgcccaagttatgcttgagtattttaagcatgtacaaaaggagagtcccaacttcttctattctatagatttaaatgaagagcagcgcttaagaaatctattttggattgatgcaaaaagtatcaatgattatctcagctttaacgatgtagtttcatttgataccacttacataaagagcaatgacaagcttccatttgcaccttttgttggagtgaaccaccactctcaacctatattgcttggatgtgcattgcttgcagatgagactaaaccaacatttgtttggttaatgaagacatggcttagagctatgggtgggcaagctcccaaagttataatcactgatcaagacaaagccttgaagactgcaattgaagaagtctttccaaatgtccggcattgtttttctctttggcacataCTGGAGAGCATACCTGAAAATCTCTCTTTTGTGATAAAAAAGCATCAGAACTTCTTGCCAAAATTTAACAAGTGCATTTTTAAATCATGGACAGATGAACAGTTTGACATGAGATGGTGGAAAATGGTCAGTATATGTGAACTGCAAGATGATCTATGGTTTCAGTCACTGTATGAGGACCGGAAAAAAtgggtgccaacttacatgggggatgcctttttagctggaatgtctacacctcagcgctctgaaagtatgaactttttctttgacaaatatattcataagaaaattacccttaaagagtttgtgaaacaatatgggataattcttcagaataggtatgacgaggaagccattgcagattttGATACATTGCACAAACAGCCAGCACTTAAATCTCCTTCACCTTGGGAAAAACAAATGTCAACAGTTTATACACATGCAATATTTAAGAAATTTCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAGGATAGAGGCTGGAGATGGCACTATTGCAAAATTTATAGTTCAAGATTACGAGAAGGATGAAGAGTTTTTGGTAACTTGGAATGAGTTGAGCTCAGAGGTCTCTTGCTTTTGTCGATTGTTTGAATATAAAGGTTTCCTTTGCAGGCATGCATTGAGTGTTCTCCAACGTTGTGGTTGTTCTTGTGTTCCATCCCATTATATCTTGAAGAGGTGGACCAAAGATGCCAAAATTAAGGAATTGATGGCAGATAGGACGAGAAGGACACAAACTAGGGTACAACGTTATAATGACTTGTGTAAACGAGCTATTGATTTGAGTGAAAAAGGATCGTTATCTGAAGAGAGTTACAATGTTGTTTTTCGTACACTTGTCGATGCCTTGAAGAACTGTGTACTTGTGAATAATTCTAATAACAATGGTGCAGAAACTAGCAGCAATGCCTATGGCCTTCGTGAAGCAGAAGAAAATCAGGTTCCTCTTGCTTTGAAACCAAATAAAAAGAGGAATGCAGCCAGGAAAAGAAAGGGACAATTAGAGCAGGATGTTATACTTGTTGATGCTCAAGATAGCCTGCAGCAAATGGATAATCTTAGCACAGATGCAATAACCCTTAATGGATATTATGGTACCCAGCAGAATGTGCAAGGACTGCAGGTACAGTTGAACTTAATGGAGCCACCTCAGGATGGTTACTATGTTAATCAACACAGCATGCAAGGCCTGGGTCCATTGAATTCTATGGGTCCAAGCCATGATGGGTTTTTTGGAACACAGCAAGGCATTCATGGGCTGGGAGGGCAGTTGGAATTTCGTCGAGCAACTACTTTTGGATATAGCCTTCAGGATGAACCTGATCCCCAGTTTCATGGCAACAGTTCGAGAAATACTTAG 2430 0.2979 MGDALNEVQHMGGAPAASPKRDITLLEGDKDFELHNGIEFESHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGSSRRPSVKKTDCKACMHVKRKPDGKWIIHEFIKEHNHELVPALAYHFRIHRNMKLAEKNNIDILHAVSERTRKMYVEMSRQSSSCQNIGSFLGDINYQFDRGQYLALDEGDAQVMLEYFKHVQKESPNFFYSIDLNEEQRLRNLFWIDAKSINDYLSFNDVVSFDTTYIKSNDKLPFAPFVGVNHHSQPILLGCALLADETKPTFVWLMKTWLRAMGGQAPKVIITDQDKALKTAIEEVFPNVRHCFSLWHILESIPENLSFVIKKHQNFLPKFNKCIFKSWTDEQFDMRWWKMVSICELQDDLWFQSLYEDRKKWVPTYMGDAFLAGMSTPQRSESMNFFFDKYIHKKITLKEFVKQYGIILQNRYDEEAIADFDTLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVAGCQSRIEAGDGTIAKFIVQDYEKDEEFLVTWNELSSEVSCFCRLFEYKGFLCRHALSVLQRCGCSCVPSHYILKRWTKDAKIKELMADRTRRTQTRVQRYNDLCKRAIDLSEKGSLSEESYNVVFRTLVDALKNCVLVNNSNNNGAETSSNAYGLREAEENQVPLALKPNKKRNAARKRKGQLEQDVILVDAQDSLQQMDNLSTDAITLNGYYGTQQNVQGLQVQLNLMEPPQDGYYVNQHSMQGLGPLNSMGPSHDGFFGTQQGIHGLGGQLEFRRATTFGYSLQDEPDPQFHGNSSRNT 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01263 809 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
Gma20g01263 809 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 12 724 - -
Gma20g01263 809 MobiDBLite consensus disorder prediction 1 22 - -
Gma20g01263 809 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Gma20g01263 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 724 IPR031052 GO:0006355
Gma20g01263 809 Pfam MULE transposase domain 255 347 IPR018289 -
Gma20g01263 809 Pfam SWIM zinc finger 537 570 IPR007527 GO:0008270
Gma20g01263 809 SMART 26again6 546 573 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01263 Gma-Chr20 39396256 39399337 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma20g01263 MULE 1.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01263 - - gmx:100814153 1622.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02445 10 51970780 51974560 Gma20g01263 20 39396256 39399337 GST