Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01259 ATGCTGCGTTTGTGCTACGGCCCTCTGGATTGCTGCTTCGGACGCCGTGGTGGCCGCGCCGCCGACGGACTTCTCTGGCACACCGACTTGAAGCCCCACGCCTCCGGCGACTTCTCCATCGCCGTCGCCCAGGCGAATTACAGTCTTGAGGATCAGAGCCAAGTCTTCACCTCCCCCTCCGCCACCTACGTCGGCGTCTACGACGGCCACGGCGGCCCCGAAGCTTCCAGATTCGTCAACAAGCGTCTCTTCCCTTATTTGCACAAATTCGCCACTGAGCAAGGGGGTTTGTCAGTGGATGTGATTAAAAAGGCGTTCAGTGCCACAGAGGAGGAATTCTTGCATTTGGTGAAGCTATCCATGCCCATTAGTCCCCAGATTGCTTCCGTCGGATCCTGTTGCCTTTTTGGTGCAATTTCTAATAATGTGTTGTATGTTGCAAACCTTGGAGACTCGAGAGCTGTTCTTGGCAGGAGGGATACAGAGAGAAAGAACAGTCCGGTGGTGGCACAGCGTTTGTCAACTGATCATAATGTAGCTGATGAGGAGGTGAGAAAAGAAGTTGAAGCTCTCCATCCCGATGACTCACACATTGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAGGGCATTATACAGGTGTCAAGATCTATTGGTGATGTGTATTTGAAGAAACCAGATTTCTACCGTGACCTGGGTTTTCAGCAGTTTGGAAATCCTATTCCTTTGAAGCGTTCTGTAATGACAGCTGAACCATCAATCATTATTAGGGAGCTTGAGTCAGAGGATTTATTCTTGATATTTGCATCAGATGGCCTCTGGGAACAATTAAGTGATGAGGCTGCGGTTCAGATCGTTTTCAAACATCCAAGAGCTGGAATTGCCAAGAGACTGGTGAGAGCTGCTCTTCATGAAGCTGCAAAGAAGAGAGAGATGAGATACGATGACATAAAGAAAATTGACAAAGGAATAAGACGACACTTCCATGATGATATCACTGTGGTTGTAATCTATCTTGATCACCATGCAGGCTCCTCTAAGCAAACTGCTGTTGGCTATACAACTGCCCCAGTTGATATTTTTTCCCTAAATGCGGATGGGATGCTTGGTACAGTTGCCTAA 1122 0.4831 MLRLCYGPLDCCFGRRGGRAADGLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKRLFPYLHKFATEQGGLSVDVIKKAFSATEEEFLHLVKLSMPISPQIASVGSCCLFGAISNNVLYVANLGDSRAVLGRRDTERKNSPVVAQRLSTDHNVADEEVRKEVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKKPDFYRDLGFQQFGNPIPLKRSVMTAEPSIIIRELESEDLFLIFASDGLWEQLSDEAAVQIVFKHPRAGIAKRLVRAALHEAAKKREMRYDDIKKIDKGIRRHFHDDITVVVIYLDHHAGSSKQTAVGYTTAPVDIFSLNADGMLGTVA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01259 373 CDD PP2Cc 50 339 IPR001932 -
Gma20g01259 373 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 367 - -
Gma20g01259 373 SUPERFAMILY PP2C-like 46 341 IPR036457 -
Gma20g01259 373 Pfam Protein phosphatase 2C 58 308 IPR001932 -
Gma20g01259 373 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Gma20g01259 373 PANTHER ALPHABET, ISOFORM E-RELATED 4 367 - -
Gma20g01259 373 SMART PP2C_4 31 337 IPR001932 -
Gma20g01259 373 Gene3D - 28 350 IPR036457 -
Gma20g01259 373 ProSiteProfiles PPM-type phosphatase domain profile. 37 339 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01259 Gma-Chr20 39356352 39359338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01259 22 346 PP2C-type Phosphatase Gene Family AT3G51370 57.658 2.50e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01259 - K01102 gmx:100813810 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02449 10 52003770 52007074 Gma20g01259 20 39356352 39359338 GST
Gma01g01943 01 54906930 54910141 Gma20g01259 20 39356352 39359338 PCT
Gma11g00464 11 3855400 3859399 Gma20g01259 20 39356352 39359338 PCT